Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1862 ATGGATATCAACCAAAACCCTACAATGTTTACAAGCGTTAACAACACTACCACTTGGAATAATCTGAACAATATGGAAATGGATCATAATCTCCATCATCATCATCAAATCCATATGTGTTCCTCTTGGCCTAATTACCCTAATTACCCTCATCAGATCATACCACCTTCTTCTTCTTCCTCCACCACAATACCCTCTTCAGGGTTTCTAAACAACGTCGTTTTGGAAGAAGAAGATGAAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAGCTGGGAGCTGTGAAGGAGATGCTGTACAAGATCGCGGCTATGCAGCCGGTGGACATAGACCCGGCCACCATCCGAAAGCCGAAGAGACGAAACGTCAGGATCAGCGACGATCCACAAAGCGTCGCCGCCAGACAGCGGCGAGAGAGGATCAGCGAGAAGATCCGAATCCTCCAAAGACTTGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTTGATGAAGCGATTCGCTATGTCAAGTTCTTAAAGCGACAAATCAGGCTTCTCCGATCTCAACCACCACCACCACCACAACAATGCATCACTAATAACAATACTCTTGCCAATATTGGTGTTATCAACACTGCTAGTACTAATATTCATAGTGATCATTGGCCTTTTACACCACCGTCGTCTTTACTACACTGTCCCACAGCCACCGCCACCTCCTCCGCTGCTGCCGCCATGGGCATGCCGGTCAGACTAGGACTCGGCTCGGGCTATAATCATGAGTGA 768 0.4792 MDINQNPTMFTSVNNTTTWNNLNNMEMDHNLHHHHQIHMCSSWPNYPNYPHQIIPPSSSSSTTIPSSGFLNNVVLEEEDEEGEGEGEEEELGAVKEMLYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARQRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLRSQPPPPPQQCITNNNTLANIGVINTASTNIHSDHWPFTPPSSLLHCPTATATSSAAAAMGMPVRLGLGSGYNHE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1862 255 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 214 IPR045843 GO:0003700|GO:0006355
Alju13g1862 255 SMART finulus 130 179 IPR011598 GO:0046983
Alju13g1862 255 Gene3D - 127 185 IPR036638 GO:0046983
Alju13g1862 255 FunFam BHLH transcription factor 127 186 - -
Alju13g1862 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 186 IPR036638 GO:0046983
Alju13g1862 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Alju13g1862 255 CDD bHLH_AtIND_like 125 182 - -
Alju13g1862 255 Coils Coil 163 183 - -
Alju13g1862 255 Pfam Helix-loop-helix DNA-binding domain 134 173 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1862 Alju-ChrAlju13 36263891 36264658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1862 91 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 86.275 7.00e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju13g1862 HLH 4e-07 No_clan