Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1853 ATGGAAAGTTGTGAGCATAATTCTTTTATGATGTTTGATTGTACCATGTGTAATTGACCTCGATCGATGGCGAAAACGAAATTGATACCTGGATTTCGGTTTCATCCCACCGACGTTGAGCTGGTTGAGTACTTTTTGAAGAGGAGGGTCATCGGAAAAAAGTTTCCCCTTGAAGTGATCGCCGAAGTCGACGTATACAAATATGCTCCATGGGACCTCCCAGGTCATTTTTTGTATGTTTCAGATAAATCGTTAATGAGCACTGTGGATTTGGAATGGTATTTCTTTTGCCCTAGAGCAAAAAAATATATGACTGGAGGTAGAATGAATAGGAGTACGGAAGTAGGATATTGGAAAACCACAGGAAGGGACAAACCTATTTGGCATAATAATCAAAGTGTTGGTTTGATGAAAGTTCTAGTCTTTCACATGGGTCGACCACCTAAAGGACATCGAACTGACTGGGTTATGCATGAATTTAGGCTTCATAATAGTAAGGATCTCGCTGCCAAAGACATCGCACAGGACTCGTATGTGCTTTGTAGGGTGTTCAAGAAGGATGGACGTGGTCCTAGGAATAATGGAGGACAATATAGTAAACTGTTTGACGAGGAAAACTGGGATGACGAGGAAGATTCTATTTCTATTGCTGATCTTGAAGAACCACTTCGTGTTCTGCCTGTTATTGCACACAACGACAACAACAATCTCTCGCCATGTGAATCCAATTGGTCGCCGACGACCCCGAAGTCAAGTTTGTCATCAGGGGCGACTCATAATCCTTCAGTAGTGAATAAAGACGACGTTGTTTCTCAAATTCCACCTGGAGAGGACGATGCGTTATGCTTGTTGGATTGTTTCTCAGAAGAAGAAATACACGTGTTGGTTCTAAGTAATGGAGACAACAATATAGAGGCGAGTGTTAATTCTGAGGAGAAAAAAGAAAGTGAAGGATTTCCATTTGATGATATTTTTAGGGACTTGGAAGAACTCAACAACTTGGCTGCATTGGATAATGAAGATTAA 1026 0.4113 MESCEHNSFMMFDCTMCNXPRSMAKTKLIPGFRFHPTDVELVEYFLKRRVIGKKFPLEVIAEVDVYKYAPWDLPGHFLYVSDKSLMSTVDLEWYFFCPRAKKYMTGGRMNRSTEVGYWKTTGRDKPIWHNNQSVGLMKVLVFHMGRPPKGHRTDWVMHEFRLHNSKDLAAKDIAQDSYVLCRVFKKDGRGPRNNGGQYSKLFDEENWDDEEDSISIADLEEPLRVLPVIAHNDNNNLSPCESNWSPTTPKSSLSSGATHNPSVVNKDDVVSQIPPGEDDALCLLDCFSEEEIHVLVLSNGDNNIEASVNSEEKKESEGFPFDDIFRDLEELNNLAALDNED 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1853 341 MobiDBLite consensus disorder prediction 236 267 - -
Alju13g1853 341 MobiDBLite consensus disorder prediction 236 268 - -
Alju13g1853 341 Gene3D NAC domain 37 189 IPR036093 GO:0003677|GO:0006355
Alju13g1853 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 26 252 - -
Alju13g1853 341 Pfam No apical meristem (NAM) protein 30 162 IPR003441 GO:0003677|GO:0006355
Alju13g1853 341 ProSiteProfiles NAC domain profile. 28 186 IPR003441 GO:0003677|GO:0006355
Alju13g1853 341 SUPERFAMILY NAC domain 14 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1853 Alju-ChrAlju13 36211605 36215551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1853 23 334 NAC Transcription Factor Family AT5G09330 42.169 5.38e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju13g1853 NAM 5.5e-32 No_clan