LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g1848	ATGCCCGCTTGGTGGGGAAGAAAGTCCAGCAAGAACAAGGAGGAGCAGCGGCAACAGCAGCAGCTTCCCCAGCCTGAATCACATGGCGGAATTCAGTTTAATTTCATCAAATCACCGATCAGGAATGGTGCCAAGAAAGGTAGAGATAAACCTAAGAGCTTTGACGAGGTCTCAGCAGCGATGATTTCTCGGAGTTCACCGAGAACCAGCAGGGATTTTACTCCTGCCGCCGCCGCCGCTCCTCCCGTTGGTGGATCGTCCTCGGGATTTTCGTGTTTCGATTCTGATGGCGGCGAGAAGGTAGGCCATCCCTTGCCTCGACCGTCGATTTCGTCCCCGCAGAGCCTTGGGAACGATCAAGGAGATGGAGATGGCCTGGGATCTGCGTCGATCTCTGGTTCAAGCGTGAGTTCTTCTGGGTCCTACGATCATCATCCAATCTCTCAATTTGATGGCATCAGGGGACGAGGTGAAATGAGGATTAACATGAGGTCAAAAAGCCCAGGTCCCGGGTCAAGAGGGCCCACCAGCCCGACCTCACCCCTCCATCCAAGATTGCATGTTTTAAGTATGGACTCTCCTACAGGCAAACAAGATGATGGAAGGAGTGAATGTCATCCATTGCCTCTACCACCAGGTTCACCGACTAGCCCCTCTGCTCTCTCCAATGCAAAAGCAAATAGTCTTGTAGAAAACACTACCAACAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTGGGACGAGGGACATTTGGTCATGTTTACCTGGGATTTAACAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTCTCTGATGATCAAACATCGAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATCTGCTCAGTTCGTTTTCACATCCTAACATTGTTGAATACTATGGGAGTGACCTGGGAGAAGACGCACTTTCTGTTTATTTAGAGTTTGTCTCTGGCGGTTCCATCCATAAACTACTTCAGGAATATGGTCCATTTAAGGAACCTGTTATTCAGAATTATGTTAGGCAGATTGTCTCTGGACTTGCATATCTGCATGGAAGAAACACAGTGCACCGGGATATCAAAGGGGCAAACATACTAGTTGACCCTAATGGCGAAATTAAGTTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCTACCTCCATGCTTTCCTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTTATGAATACAAATGGCTACAATCTTGCTGTGGATATATGGAGCTTGGGATGCACAATTCTGGAAATGGCGACATCAAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAAGGATATGCCTGAAATCCCAGAGCATCTTTCAAATGATGCCAAGTCTTTCATACAGCTATGCTTACAAAGAGATCCGTCAGCTCGCCCAACTGCTCAAAGGCTGCTAGAGCATCCCTTTATTCGCGATCAATCTGCAACAAGAGCTGCCAATGTCAGCTTAACCAGAGATGCTTTCCCCTACATGTTTGACGGAAGCCGGACGCCGCCACATGTAGAGCCTCATTCCGGTAGAACAAATATGACGTCAGTGGATGGAGATTATGCAACAAAGCCAACTTTTTCAACTTCACGAGCATTAAGGAGCCCAAGAGATAACACAAGAATGATTACATCTTTACCAGTATCACCCTGCTCAAGTCCATTGCGGCAGCATGGATCATCAGCATACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTTCACCTCGGTGGGACAAAATACCTACAATTTTAGCGATCTCTCATCATATCCTGTGAGATCAAACGCCACCTTCACATTAGATCCTTGGAACGAGAGATCTCTATATAACGCCCATACGCCTGGCGGGTCCCCGAGGAGGAGACTCATTTGA	1941	0.4683	MPAWWGRKSSKNKEEQRQQQQLPQPESHGGIQFNFIKSPIRNGAKKGRDKPKSFDEVSAAMISRSSPRTSRDFTPAAAAAPPVGGSSSGFSCFDSDGGEKVGHPLPRPSISSPQSLGNDQGDGDGLGSASISGSSVSSSGSYDHHPISQFDGIRGRGEMRINMRSKSPGPGSRGPTSPTSPLHPRLHVLSMDSPTGKQDDGRSECHPLPLPPGSPTSPSALSNAKANSLVENTTNNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDQTSKECLKQLNQEINLLSSFSHPNIVEYYGSDLGEDALSVYLEFVSGGSIHKLLQEYGPFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYNLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKSFIQLCLQRDPSARPTAQRLLEHPFIRDQSATRAANVSLTRDAFPYMFDGSRTPPHVEPHSGRTNMTSVDGDYATKPTFSTSRALRSPRDNTRMITSLPVSPCSSPLRQHGSSAYKSCMLSPPHPTFTSVGQNTYNFSDLSSYPVRSNATFTLDPWNERSLYNAHTPGGSPRRRLI	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g1848	646	FunFam	Mitogen-activated protein kinase kinase kinase	238	520	-	-
	Alju13g1848	646	SUPERFAMILY	Protein kinase-like (PK-like)	237	578	IPR011009	-
	Alju13g1848	646	MobiDBLite	consensus disorder prediction	522	545	-	-
	Alju13g1848	646	SMART	serkin_6	240	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g1848	646	Pfam	Protein kinase domain	241	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g1848	646	ProSitePatterns	Protein kinases ATP-binding region signature.	246	269	IPR017441	GO:0005524
	Alju13g1848	646	MobiDBLite	consensus disorder prediction	108	145	-	-
	Alju13g1848	646	CDD	STKc_MEKK1_plant	239	496	-	-
	Alju13g1848	646	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	61	505	-	-
	Alju13g1848	646	ProSiteProfiles	Protein kinase domain profile.	240	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g1848	646	Gene3D	Transferase(Phosphotransferase) domain 1	237	516	-	-
	Alju13g1848	646	MobiDBLite	consensus disorder prediction	1	225	-	-
	Alju13g1848	646	MobiDBLite	consensus disorder prediction	528	545	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g1848	Alju-ChrAlju13	36167709	36172858	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g1848	1	559	MAP Kinase Kinase Kinase	AT1G53570	57.268	0.0	573

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Alju13g1848		Pkinase	5.4e-73	CL0016