Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1811 ATGGTAAAGGAAGAAGTCAGCAATGATAGTTACTCAAAAGCTGAGCCTGAGGATTCAGAATCTCACTCTCAACATAGTCCTGAGAAGGAGACAGGCTGGACGAGGATGAATTGTCGTGTGTGCCAGTGTGCTGAATCTGATAAGAGGGGAGATGCTGCTCTAGAATTTTTGGGCATTGCACCAGTTTTAGAATCTGATGTAAATAATGTCGAAGAAAGGCCAGATTGTGAGGAAATTTCCAAAAATGCATCTCTTAAAAGAAGCGTGGGAAGTAAGTCTGGGGTTGTGGAGTTTGTAAGCCCTGATGGAGAGGTTTTCATTTGCAAAACTGATTTAGAAATGGGTCTTTCTCATCGAGACACTCTTATTGAACTTGGCTGCTGTTGTAAAAATGACCTTGCTGCAGTACACTATGCTTGTGCTCTTAAATGGTTTGTCAATCATGGATCTACTGTCTGTGAAATATGTGGAAATGTGGCAAAAAATATCAGAATTGCTGACTTCAACAAGGTTGTCGCTTCTTTGAAAGAATATGAAGCATTGAGGGAAAGAACTGCCATTGGGCAACCCAGTCTTGCTCAAGTTCATGCAAATACTGGTATAGATCCTGATGCTGTGGCTGCTATCAGGAGGCAACGGCTAAGTGAAATTGCTCTATGGTTTTGTCCCCGTAATACCAGTAACAACAACAATGCGGACACAGTCTCACCAGTTGTTTCTGAACAACCTTTAAATAGTATTACCGAAGATGCTGCACCTGTTCAAAATCCTGCAACTAAGTGGGCAGTGGAAGTTACTGGGATCCTGCTTGCTACTGGGCTACTTACTGTCACCCTTGCATGGCTCATAGCTCCCCGTGTTGGAAAGAAAACTGCAAGAAATGGTCTTCATATCCTACTTGGAGGTATCTGCGCTTTAACTGTTGTGGTTTTCTTCCGCTTTTTCGTGCTCACCAGAATTAAGTATGGACCTGCACGTTACTGGGCAATTTTGTTCATTTTCTGGTTTCTTGTGTTTGGGATATGGGCTTCACGGACACACAGTGCTCATACGACGTGA 1059 0.4306 MVKEEVSNDSYSKAEPEDSESHSQHSPEKETGWTRMNCRVCQCAESDKRGDAALEFLGIAPVLESDVNNVEERPDCEEISKNASLKRSVGSKSGVVEFVSPDGEVFICKTDLEMGLSHRDTLIELGCCCKNDLAAVHYACALKWFVNHGSTVCEICGNVAKNIRIADFNKVVASLKEYEALRERTAIGQPSLAQVHANTGIDPDAVAAIRRQRLSEIALWFCPRNTSNNNNADTVSPVVSEQPLNSITEDAAPVQNPATKWAVEVTGILLATGLLTVTLAWLIAPRVGKKTARNGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHSAHTT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1811 352 PANTHER ZINC FINGER, RING-CH-TYPE 13 319 - -
Alju13g1811 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 160 IPR013083 -
Alju13g1811 352 SMART ringv_2 107 157 IPR011016 GO:0008270
Alju13g1811 352 ProSiteProfiles Zinc finger RING-CH-type profile. 97 163 IPR011016 GO:0008270
Alju13g1811 352 MobiDBLite consensus disorder prediction 1 29 - -
Alju13g1811 352 SUPERFAMILY RING/U-box 121 159 - -
Alju13g1811 352 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1811 Alju-ChrAlju13 35877386 35880953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1811 16 342 C3H Transcription Factor Family AT5G08750 64.327 9.27e-144 409