Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1809 ATGCACAACCGCTTAAAAGGAAATTTGGGAAGGGGAGGAGGAGGAGGAGGAGCCATGGGAGATGGCAATAGCGCCTCTGGCAACAATCGGTCTAACAACAATAACAGTAATAAGCCTGAGTGGCTACAACAGTACGATCTGATAGGGAAAATTGGGGAAGGTACCTATGGTCTTGTGTTCCTCGCAAGGATCAAGTCTGCAACGAATCGTGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCAGGGAGATAACGCACGAAAATGTCGTGAAGCTTGTAAATGTTCACATCAATCATGCGGATATGTCTCTGTACCTAGCTTTTGATTATGCTGAACACGACCTTTATGAAATCATTCGACATCACAGGGACAAAGTCAACCATTCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGTTGCTCAACGGACTAAACTATCTGCATAGTAATTGGATAATTCATCGAGACCTTAAGCCATCGAATATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCTTTAAAGCCTTTATCTGAAAATGGAGTTGTTGTTACCATATGGTATCGTGCACCCGAGTTGCTTCTTGGGGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTAACACTAAAACCACTGTTTCAAGGAGCAGAAGTCAAAGCCACACCTAATCCATTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTACCCTAGCATATCTTCCACATTGGCAATCAGATCTTCAGCATATACAAGGGCACAAATATGACAACACTAGCCTTTGTAATGTTGTCCACCTACCTCCAAAAAGTCTTGCTTATGATCTCCTATCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTGCCTGGGCGGAATGCTCTTGTGCCCTGCCAACCTGGAGAGAAAATTGTGAATTATCCCACTCGTCCAGTTGACTCAACAATAGATTTTGAAGGGACAACCAATTTGCAACCTTCTCAACCGGTTTCATCTGGAAATGCTGTTTCTGGCGGCATGCCAGGTGGTCATTTATCAAATAGATCTGTCCCTCGGCCAATGAATGTTGTGGGCATGCAGAGGATGCCACCTATGCAAGCTTATAATCTTGCATCCCAGGCAGGGATGGGCGGTGGAATGAATTCTGGCATCTCTATGCCACGAGGTGTTGCACAGGCTCATCAGCAGCAGCAGTTGAGAAGGAAAGACGGCGTAACTAAGATATCGAGTACAGATAGGTTGTGCTCAACATTGGGGCATTTGGAACTCATTCAGGATCCCAAGTTCGAATGGCTTACCTTCATTGGTTGCTGGCCAAGTGCAGTCAAAAAGATCTTGCCATGCTCTGGAATCTGGATGCTAAAGCATGAGCTACAATGGTCAATATGCTGA 1605 0.4399 MHNRLKGNLGRGGGGGGAMGDGNSASGNNRSNNNNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPTLAYLPHWQSDLQHIQGHKYDNTSLCNVVHLPPKSLAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKIVNYPTRPVDSTIDFEGTTNLQPSQPVSSGNAVSGGMPGGHLSNRSVPRPMNVVGMQRMPPMQAYNLASQAGMGGGMNSGISMPRGVAQAHQQQQLRRKDGVTKISSTDRLCSTLGHLELIQDPKFEWLTFIGCWPSAVKKILPCSGIWMLKHELQWSIC 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1809 534 MobiDBLite consensus disorder prediction 392 406 - -
Alju13g1809 534 FunFam Cyclin-dependent kinase e-1 33 128 - -
Alju13g1809 534 MobiDBLite consensus disorder prediction 1 38 - -
Alju13g1809 534 Gene3D Transferase(Phosphotransferase) domain 1 128 370 - -
Alju13g1809 534 MobiDBLite consensus disorder prediction 22 38 - -
Alju13g1809 534 FunFam Putative cyclin-dependent kinase E-1 129 368 - -
Alju13g1809 534 Pfam Protein kinase domain 45 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1809 534 SUPERFAMILY Protein kinase-like (PK-like) 40 357 IPR011009 -
Alju13g1809 534 CDD STKc_CDK8_like 44 355 - -
Alju13g1809 534 ProSitePatterns Protein kinases ATP-binding region signature. 51 78 IPR017441 GO:0005524
Alju13g1809 534 SMART serkin_6 45 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1809 534 PANTHER CELL DIVISION PROTEIN KINASE 43 361 - -
Alju13g1809 534 Gene3D Phosphorylase Kinase; domain 1 28 127 - -
Alju13g1809 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Alju13g1809 534 MobiDBLite consensus disorder prediction 392 420 - -
Alju13g1809 534 ProSiteProfiles Protein kinase domain profile. 45 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1809 Alju-ChrAlju13 35866464 35872768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1809 19 474 Core Cell Cycle Gene Families AT5G63610 76.739 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Alju13g1809 Pkinase 6e-68 CL0016