Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1804 ATGTCTCCAGCTTGTGAATATTCCTCGGAGATCAGAGAGGCTCATATTCCACTAAATCAGATGACCAGGTGGCTGGTATTCTTGTCCATCTTAGGACTCAGCTGTGCAACTACTGGTCCTGATGTAGAAGGTGAAGCTTTGTTAGATTTTTTGAAGGTCCTCAATGATTCAAACCATCAGATGACAGACTGGAATAGTTTTCTTGTGAGCCCTTGCTTTAGCTGGTCTCATGTCACATGCAGAGATGGACATGTCATATCTCTGAGCTTGGGTTCAAAAGGATTTTCTGGAACACTCTCCCCTTCAATTACCAAATTGAAATACTTGATTACCTTGGAATTGCAGAACAATAGCCTTTCAGGTTTCTTACCCGATTATATTGCCAACCTGACACGCCTGCAATATCTAAATCTTGCTGACAATAATTTCAATGGTTCTATGCCATCTACATGGGGTCAACTTTCCTCCCTGAGGACTCTGGTATTGAGAGGGAATGACTTGTCTGGATCCATACCCAATTCTGTTGAAAATCTTAGTGGGTTATCAGAATTGGATCTTTCTTCTAATAAGTTAACCGGAACCATCCCAAAGCACCTCTTTTCAGTTCCAATCTTCAACTATTCAGACACAGACCTTCATTGTGGCTCTAGCTTGGAGCAGCCTTGTGTTTCTAATTCAGCTATACCTGCTTCAACCAACAAATCAAAACTAGCAGTGGCTTTAAGTTTGGCAAGTTGTGGCGCCTTTGGAATTCTGTGTCTGGGGACCATCCTTACATATGTATACCAATCCATTCAAAGACACAAAAATGATGTTTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAGATCTCATTTGGGCAACTGAGGAGATTTTCTTTGCGTGAACTCCATCTAGCTACAAACAATTTCAGTGAGAGCAACATGATTGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGAGTACTCTCAGACAAGATAAAGATTGCAGTAAAACGCCTGGCTGATTATCATAATCCTGGTGGAGAAGCTGCTTTCCAAAGAGAAGTTCAACTTATAAGCGTTGCAATTCATAGAAATCTCCTGCGTTTGATTGGCTTCTGTACAACCTCAACCGAGAGAATCCTCGTATATCCTTTCATGGAAAATCTAAGTGTTGCATATCGTTTGAGAGATTTGAAACCTGAAGAGAAAGGTCTGGACTGGCCAACAAGGAAACGTATAGCATTTGGTACAGCGCATGGGTTGGAGTATTTGCACGAGCAGTGTAATCCTAAGATCATACACCGTGATTTGAAGGCGGCGAATATCCTATTAGATGATGAATTTGAAGCAGTTCTTGGAGATTTTGGGCTGGCTAAGCTGGTTGACACAAGGCTGACTAGTGTTACCACTCAAGTGAGGGGTACAATGGGACATATAGCCCCAGAATACTTGTCCACAGGAAAATCATCAGAAAAAACAGATGTCTTTGGATATGGCATAACACTTCTTGAGATTGTGACAGGTCAACGAGCAATCGACCTCTCACGGCTTGAGGAAGAGGAGGATGTTCTTCTGCTAGATCATATTAAGAAGTTGCTGAGAGAGAAGAGGATAAAGGACATAGTGGACAAGAATTTGGAGAGTTATGATGCAAAGGAAGTGGAGAGGAATGTTCAGGTGGCGTTGCTTTGCACGCAAGGTTCACCGGAGGATCGGCCAAGCATGTCAGAGGTGGTGAATTTGCTGAATGGGGAAGGTTTGGCAGAGAGATGGGCTGAGTGGGAGCTAATGGAAGAGATGAACAATAGAGAAATGTCACTGTTGGATCACCAATTTGCTTGGGCTGATGAATCTACGCATGATCAAGAGGCTATTCAGCTTTCCTGGGCAAGATAA 1881 0.4269 MSPACEYSSEIREAHIPLNQMTRWLVFLSILGLSCATTGPDVEGEALLDFLKVLNDSNHQMTDWNSFLVSPCFSWSHVTCRDGHVISLSLGSKGFSGTLSPSITKLKYLITLELQNNSLSGFLPDYIANLTRLQYLNLADNNFNGSMPSTWGQLSSLRTLVLRGNDLSGSIPNSVENLSGLSELDLSSNKLTGTIPKHLFSVPIFNYSDTDLHCGSSLEQPCVSNSAIPASTNKSKLAVALSLASCGAFGILCLGTILTYVYQSIQRHKNDVFVDVSGEDESKISFGQLRRFSLRELHLATNNFSESNMIGQGGFGKVYKGVLSDKIKIAVKRLADYHNPGGEAAFQREVQLISVAIHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPEEKGLDWPTRKRIAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRLTSVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDLSRLEEEEDVLLLDHIKKLLREKRIKDIVDKNLESYDAKEVERNVQVALLCTQGSPEDRPSMSEVVNLLNGEGLAERWAEWELMEEMNNREMSLLDHQFAWADESTHDQEAIQLSWAR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1804 626 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Alju13g1804 626 Gene3D Transferase(Phosphotransferase) domain 1 381 597 - -
Alju13g1804 626 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Alju13g1804 626 SUPERFAMILY Protein kinase-like (PK-like) 282 577 IPR011009 -
Alju13g1804 626 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1804 626 ProSiteProfiles Protein kinase domain profile. 304 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1804 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 24 588 - -
Alju13g1804 626 Pfam Leucine Rich Repeat 156 178 IPR001611 GO:0005515
Alju13g1804 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Alju13g1804 626 FunFam Leucine-rich repeat receptor-like protein kinase 40 197 - -
Alju13g1804 626 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1804 626 SMART LRR_typ_2 178 202 IPR003591 -
Alju13g1804 626 SMART LRR_typ_2 130 153 IPR003591 -
Alju13g1804 626 SMART LRR_typ_2 154 177 IPR003591 -
Alju13g1804 626 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Alju13g1804 626 FunFam Somatic embryogenesis receptor-like kinase 1 381 597 - -
Alju13g1804 626 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Alju13g1804 626 SUPERFAMILY L domain-like 43 307 - -
Alju13g1804 626 Gene3D Ribonuclease Inhibitor 40 224 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1804 Alju-ChrAlju13 35815987 35819543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1804 21 626 Receptor kinase-like Gene Family AT5G10290 57.119 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju13g1804 Pkinase 4e-43 CL0016