Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1794 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGGGCTGGCAATTTTGGGGTGGCTAGGCTTATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTCACAAGATTGATGAGAACGTGGCCAGAGAGATTATGAACCACAGGTCCCTTCGACACCCCAATATAATTCGATTCAAGGAGGTCATTTTGACCCCCTCACATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGGGAACTATTTGAGAGGATATGCAATGCTGGCAGATTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTTAATTTCTGTCACGCCATGCAAATATGCCACAGAGATTTAAAGCTTGAAAATACCCTTTTGGATGGAAGTCCTGCACCTCGCTTGAAAATTTGTGATTTTGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAGTCTACGGTTGGAACCCCTGCTTACATAGCACCCGAAGTTCTTTCTAGGCGCGAATATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCTAGGAATTTCCGGAAAACAATCCAGCGAATAATGGCTGTCCAATACAAAATCCCAGATTATGTTCACATATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTTTGGCTAATCCATTGAGGAGAATAACAATAAAGGAAATTAAGATCCACCCATGGTTTCTGAAGAACCTACCAAGGGAACTAACTGAATCAGCGCAGGCGGTGTATTACCAGAGAGACAACCCAAGCTTTTATTCTCAGAGTGCAGATGAAATAATGAGAATTGTCGGGGAGGCAAGAAATCCACCGCCAGTATCGAGGCCCGTCAAAGGTTTTGGCTGGGAAGGTGGAGAAGAAGGAGCAGAGGAGGAGGAGGAAGACGATGACGAAGATGAGTATGACAAGAGGGTGAAGGAGGTTCATGCAAGCGGAGAATATCAAGTCAGTTGA 1050 0.4543 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIMNHRSLRHPNIIRFKEVILTPSHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFLANPLRRITIKEIKIHPWFLKNLPRELTESAQAVYYQRDNPSFYSQSADEIMRIVGEARNPPPVSRPVKGFGWEGGEEGAEEEEEDDDEDEYDKRVKEVHASGEYQVS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1794 349 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1794 349 SUPERFAMILY Protein kinase-like (PK-like) 2 303 IPR011009 -
Alju13g1794 349 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Alju13g1794 349 MobiDBLite consensus disorder prediction 318 333 - -
Alju13g1794 349 MobiDBLite consensus disorder prediction 299 349 - -
Alju13g1794 349 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Alju13g1794 349 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Alju13g1794 349 PANTHER SERINE/THREONINE KINASE 3 298 - -
Alju13g1794 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Alju13g1794 349 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Alju13g1794 349 CDD STKc_SnRK2 3 259 - -
Alju13g1794 349 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1794 349 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1794 349 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1794 Alju-ChrAlju13 35736353 35739007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1794 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 41.156 8.91e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Alju13g1794 Pkinase 2.8e-70 CL0016