Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1791 ATGGGCAGATCTCCTTGCTGTGAGAAAGAGCACACCAACAAAGGCGCCTGGACCAAAGAGGAAGACCAGCGCCTCATCAATTACATCAACCTCCATGGCGAGGGTTGCTGGCGATCCCTCCCCAAAGCTGCTGGTTTGCTCAGATGTGGCAAGAGTTGCAGACTCCGATGGATTAACTACCTCCGACCTGATCTCAAGCGAGGCAACTTCACTGAACAAGAAGACGAGCTCATCATCAACCTCCACAGCCTCCTCGGCAACAAATGGTCTCTGATCGCCGCCAGATTACCGGGCAGAACTGACAATGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAACTCTACAGCCGTGGCATCGACCCTCAAACGCATCGACCCCTCAACGCCACCGCTGCCACCGATCCTGCCGCCCTCGTCAGCAGCAGCAACAACGACGGCAGCAATAACAACAATAACGGCAAGTTTCAGTTAGTGACCGAATTGGGTAGCGCCAACAACAACAATAATGCCACGAAGATCGTAAAAACCGAGTCGGCCGCCTGCGAAGACTCCAACAGCAGCAGTGGGGTCACCATATCAGAAGAAGCCACCTTTGCACAAGCTCCGCTCAACTTGGAGCTCACCATCGGCCTTCCCTCCGATCAGCCTGTTTCTTTGAGCCAACACGACTTTAAAGGACATCCACAACAAGACCACCGTCAACAACCTCGGCCAGAACAACAAGTCTTGTACCATTGGTATGGCAACTTTAGTAGTAGTGCTAGTCATCAAGGTGTGTGCCTGTGTTACGGTCTAGGGTTTCAAAGTAAGAATCAAGCATGTAGCTGCAAATTAGCCATGGGTGCTTCTGGTGTTGCTCCTCCTGCTCCTACCCCTCCTAATTCTGTTACTGAAACTGCCACCGATAATATGTATAGATTTTACACGCCCATGAATATTTAG 948 0.5095 MGRSPCCEKEHTNKGAWTKEEDQRLINYINLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNATAATDPAALVSSSNNDGSNNNNNGKFQLVTELGSANNNNNATKIVKTESAACEDSNSSSGVTISEEATFAQAPLNLELTIGLPSDQPVSLSQHDFKGHPQQDHRQQPRPEQQVLYHWYGNFSSSASHQGVCLCYGLGFQSKNQACSCKLAMGASGVAPPAPTPPNSVTETATDNMYRFYTPMNI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1791 315 CDD SANT 69 112 IPR001005 -
Alju13g1791 315 Gene3D - 14 66 - -
Alju13g1791 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju13g1791 315 CDD SANT 16 61 IPR001005 -
Alju13g1791 315 FunFam Myb transcription factor 68 137 - -
Alju13g1791 315 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju13g1791 315 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju13g1791 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju13g1791 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju13g1791 315 SMART sant 66 114 IPR001005 -
Alju13g1791 315 SMART sant 13 63 IPR001005 -
Alju13g1791 315 FunFam MYB-related transcription factor 13 66 - -
Alju13g1791 315 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju13g1791 315 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 219 - -
Alju13g1791 315 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Alju13g1791 315 MobiDBLite consensus disorder prediction 216 240 - -
Alju13g1791 315 Gene3D - 68 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1791 Alju-ChrAlju13 35717569 35718737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1791 1 215 MYB Transcription Factor Family AT4G09460 61.395 1.76e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju13g1791 Myb_DNA-binding 7e-15 CL0123