Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1766 ATGGAAAAGATGAATTTTATGAAGAATGGAATTTGCAAATTGCCTCCTGGATTTAGGTTCCAGCCAACAGATGAGGAGCTTGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATGTCCATTGCCTACTTCGATCATTCCCGAAGTCAATGTCTGCAACTACGATCCTTGGGATTTGCCAGGTAATTGTGAAGAGCAAGAGAGGTATTTCTTCCATTACAAGGAAGCGAAATACAGAAATGGCAATCGAATGAACCGAATGACCAAGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAGATATCATCTCCATCAAATAATAACAATGACAATTATAGATTTTCTGGGGTGAGAAAAACCCTAGTTTTCCACCAAGGGAATGCTCCAAACGGCTCTAGAACTTACTGGGTCATGCACGAATATCGCCTTGTCATTGCTGAAACCAGTGATCCCAACCCAACTCGCCAGAGTCAAGGGAAGGAGGTAGGAGATTGGGTTGTGTGTCGGATAAGCATGAAGAGGACAAGAGAAGGTGGTCATGTGTTGGCGAGAATGAAGAGAAGGTCAGAGATAGATGTTGTTAATGTGGGAGAGACAAGATTCTTTGATTTTATGAGGGTTGCTCCTGAACTTCATTATTCTGACACGTCATCGGCTTGTTCCAGCTCAAGTGACATTACAGAGGTGTGTTCAGGCGTAGCATCATGA 711 0.4304 MEKMNFMKNGICKLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEVNVCNYDPWDLPGNCEEQERYFFHYKEAKYRNGNRMNRMTKSGYWKATGSDKKISSPSNNNNDNYRFSGVRKTLVFHQGNAPNGSRTYWVMHEYRLVIAETSDPNPTRQSQGKEVGDWVVCRISMKRTREGGHVLARMKRRSEIDVVNVGETRFFDFMRVAPELHYSDTSSACSSSSDITEVCSGVAS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1766 236 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Alju13g1766 236 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Alju13g1766 236 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 187 - -
Alju13g1766 236 Pfam No apical meristem (NAM) protein 15 144 IPR003441 GO:0003677|GO:0006355
Alju13g1766 236 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1766 Alju-ChrAlju13 35549493 35550841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1766 1 207 NAC Transcription Factor Family AT5G13180 48.214 5.88e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju13g1766 NAM 1.9e-33 No_clan