Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1762 ATGGGTTGCGTGCTCGGAGCGGCGAGGGATGATGCAGTCCGAAGGGCGGTCTCCGGAGCTCAGAACCTTCGTGAGCAAAACTATGCTACTGACGGAGGTAATGCTGTTAGCGTTGTGAACGGAGGGAAGGTGAAGGAGAAGCAAAGGACTCGGCAGCATGGTAGCGAATTTGTTTATACTCTCCCGGGACCGGAACGCCGGAAACCTAGTCTTGATCCATACGCTCAAACTCCTCAGGGGTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCTATCCGGGATTGGACTCCTCGGCGCGCCAACACGTTCGAGAAACTTGCGAAGATTGGACAAGGGACGTATAGCAATGTATATAAAGCGAGAGACCTTCTTACCGGAAAGATAGTAGCTCTAAAGAAAGTTAGGTTTGATAATCTGGAGTCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCAAACATCGTTAAACTCGAGGGCTTGGTTACTTCTAGAATGTCATGCAGTCTTTACTTAATATTCGAGTATATGGAACATGATCTTGCTGGGCTTGCTGCTGGGCAAGGTGTTCAGTTCACTGAGCCTCAAGTGAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCAAAGCTGTCTTGCATCGTGATATCAAGGGTTCCAATCTGCTTATTGATGATGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCAACTTTCTATGATCCTGAGCACAAGCAACCCTTGACAAGTAGAGTTGTCACACTTTGGTATCGTGCTCCTGAGCTACTTCTTGGGGCTACACACTATGGTGTTGGCATTGACCTCTGGAGTGCTGGCTGTATCTTGGCAGAGCTGCTTACTGGGAAGCCAGTCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATATTTAAATTATGTGGTTCTCCATCTGATGATTACTGGAAGAAATATAAACTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCATATAAACGATGCATTTTAGAAACCTTCAAGGATTTCCCTCCTTCTTCCGTACATCTAATATGTACTCTTCTTTCAATAGATCCTGATGATCGTGGCACTGCCTTGGCTGCTCTAAATAGTGATTTTTTTACCACTGAGCCGTATGCTTGTGAACCGTCAAGTTTGCCAAAATATCCTCCCAGCAAAGAACTGGATATAAAACTGAGAGATGAAAAAGCTAGAAGGCGAAAAGCTCTAAATGGGAAAACTAATGCAGTTGATGGTGCCAAAAGAGTCCGAGTACGTGAGCGTGGACGGGCCATGCCTGCCCCTGAAGCTAATGCAGAGATTCAATCAAACTTGGATAGGTGGAGAGTTGTGACACATGCAAATGCAAAAAGCAAGAGCGAGAAATTCCCGCCACCTCATCAAGACGGCACCGTTGGATATCCATTGGAAGCATCTCATAAGGGACCTGTTTCATTTGGTGCCACTGATGCTTCCTTTAGCTCCGAAGTATTTAATTCAAAACCTGCTGGATCTGTCGAAGGCCATGCTGCTTCAGGACCTTACAGAGGTAAGAAAACAAAGAAAGCAGATTCTTCATCATGGAAATTGATGCGTCCATTCAAGTAA 1650 0.4612 MGCVLGAARDDAVRRAVSGAQNLREQNYATDGGNAVSVVNGGKVKEKQRTRQHGSEFVYTLPGPERRKPSLDPYAQTPQGWPSWLMAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLESESVKFMAREILVLRRLDHPNIVKLEGLVTSRMSCSLYLIFEYMEHDLAGLAAGQGVQFTEPQVKCYMKQLLSGLEHCHSKAVLHRDIKGSNLLIDDEGILKIADFGLATFYDPEHKQPLTSRVVTLWYRAPELLLGATHYGVGIDLWSAGCILAELLTGKPVMPGRTEVEQLHKIFKLCGSPSDDYWKKYKLPNATLFKPQQPYKRCILETFKDFPPSSVHLICTLLSIDPDDRGTALAALNSDFFTTEPYACEPSSLPKYPPSKELDIKLRDEKARRRKALNGKTNAVDGAKRVRVRERGRAMPAPEANAEIQSNLDRWRVVTHANAKSKSEKFPPPHQDGTVGYPLEASHKGPVSFGATDASFSSEVFNSKPAGSVEGHAASGPYRGKKTKKADSSSWKLMRPFK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1762 549 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Alju13g1762 549 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Alju13g1762 549 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Alju13g1762 549 MobiDBLite consensus disorder prediction 470 549 - -
Alju13g1762 549 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1762 549 CDD STKc_CDK9_like 104 388 - -
Alju13g1762 549 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Alju13g1762 549 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Alju13g1762 549 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Alju13g1762 549 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1762 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Alju13g1762 549 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1762 549 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1762 Alju-ChrAlju13 35512003 35515763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1762 96 422 Core Cell Cycle Gene Families AT5G10270 50.146 8.27e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju13g1762 Pkinase 4.9e-69 CL0016