Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1759 ATGTTAATGCTTTGTGTTCACTTCTCTTTTGTTTATAGACTTGATGTAGAATGTGATCTAATCCAGTTTGAGATAATTTGTATACATGGAAATATTCACTTGCATTCTAGACAATTTTGTGACAAATCATACTTCTACCTATTCTTCTTCCCTTCTCCTTCCTCTCACTGTCGAGTTAGAGAATTGAGCCTTCCCTTTTCGGATTCGGCCATTCGGGTCTTGCTGCGCTGCCTAGCGCCTACGCTGTCACTGGTGACTTTCCTACTGCTTGCACCAACTTCTACATCTGTAGCTAAATCCCCTGGATGCAAGATGGACGATGACCACCAGCGTGAAAATAGCAGACAGAAGGTGGACTACTATAGAGGAGCTCATTCCCTGTGGAGTATGGTTCCCCAGCATCAGGTAAAGGAACCGAATGCCCTGGTCATGAATAAGAAAATTATGTCTGTTATTGCAGAGAGAGAAGCTGCAATTCGAGAGCGGAATGCGGCTTTATCTGAAAAGAATGAAGCCCTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTTCTGCAGAGGGATAACGCCTTGATGGAACGGGATAATGCTCTTGCAGCCCTTCAAGTCCAGGATAATGCCACCAACTTCTCATTGGGTTGTGGCACTCAACGTGGATCAAAGCGGATGCACCATTCCTCAAATCATTTCGGTCAAATGGCAGAAGGTGCTTATAGAACAAAGGATTTGACCGCAACCGATACCTTCCCGGTAACTGTTGTAGCTTCTGAAGCGGGCAAGTATAATCAGGCCAAGAGAACAAGGGAGAACAAGGGAGATTTTTCTAAGGCATCAAAACCACTAGGCAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCGAGCTTCTTCTGAAGTGACAAAGATCAAATCTGAGTGGGATAAACAAGATGTTGGATTAAATTTGATTCAATTTGATGAAAATACCATGCCAGCCCCAGTTTGCACATGTACTGGAGTACCAAGGCAATGCTACAAATGGGGGCATGGTGGGTGGCAATCATCTTGTTGTACCACCACCTTGTCCATGTATCCATTACCACAGCTTCCAAACAAGCGACATGCACGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGGCTTCTTAGCAGGGTAGCCTCTCAAGGCCGTGATTTATCTATACCATTAGATCTCAAGCACTATTGGGCTAGACATGGAACAAATCGCTACATCACGATCAAGTAA 1260 0.45 MLMLCVHFSFVYRLDVECDLIQFEIICIHGNIHLHSRQFCDKSYFYLFFFPSPSSHCRVRELSLPFSDSAIRVLLRCLAPTLSLVTFLLLAPTSTSVAKSPGCKMDDDHQRENSRQKVDYYRGAHSLWSMVPQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNALAALQVQDNATNFSLGCGTQRGSKRMHHSSNHFGQMAEGAYRTKDLTATDTFPVTVVASEAGKYNQAKRTRENKGDFSKASKPLGKGKKVSEDLNRRASSEVTKIKSEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGHGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVASQGRDLSIPLDLKHYWARHGTNRYITIK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1759 419 MobiDBLite consensus disorder prediction 265 296 - -
Alju13g1759 419 Coils Coil 163 196 - -
Alju13g1759 419 PANTHER - 105 419 IPR010409 -
Alju13g1759 419 SMART GAGA_bind_2 105 419 IPR010409 -
Alju13g1759 419 Pfam GAGA binding protein-like family 105 419 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1759 Alju-ChrAlju13 35498571 35503482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1759 105 419 BBR or BPC Transcription factor family AT2G21240 57.098 4.94e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Alju13g1759 GAGA_bind 8.5e-98 No_clan