Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1758 ATGAAAACAACCGACGCCTCCGATCCCATCACTCTCTCCGATCAGCTTCTTTCCTCTCTTCTCGGCGAAATCCCCACCATTCCTCATTTCAAAGGTAAGTGGTCTCTCGTCACTTCAAAACTTCACCTCCTTCACTCTCGACTTGCCGATTTCTCCTCCCACTTTCCTCATTCCTCGTCCTCCAACTCTCTCTCCAGAGACCTTCTTCTCTCCATAGCCAAGACGCTCAGGGATGCCGTTTCCCTCGTCAAGGATTGCCAGTTCTCCACCTTGTCCCACGGCAAGCTCAAGACCCAGAGCCTCATTGATTCCCTCCTTGCCACCCTCGACCGCTATCTCTCAGACTCCGATGTTCTCCTCAAAAGCGGCATCCTCCTGGACGACGCCGTTTCAACTACGTCTAACAGGGACGCCGTTCGATCTGAATCTAGGAATTTGACCGCTCGTCTGCAAATTGGGTCCTCTGAGTCTAGGATTTTGGCTATGAACTCTTTTCTGGGTTTACTGCAAGAGAATGATAAGAATGTGATGATAGCTGTAGCACAGGGTGTGGTTCCCGTGCTCGTTCGCTTACTGGATACGAGCTCTTCGGAAATGAAGGAGAAGATCGTTGCTGCGATATCCAGAGTTTCAACGGTAGATAACAGCAAGCATGCGTTAATTTCCGAAGGTTTGGTGCTTTTGAATCACCTGCTTCGAGTTCTTGACCATGGAAGTGGGTTTGCGAAAGAGAAAGCCTGTATTGCCCTCCAAGCTCTGACGTTCTCTAAGGAGAACGCGAGGGCAATCGGGTCTCGAGGTGGAATTTCTTCTCTACTGGACATTTGCCAAGTAGGCACGCCTGGTTCCCAAGCTTCCGCGGCTAGGGTTCTGAGAAATCTTGCGGTTTTCCCTGAAGTCACAGAAAATTTCGTCGAGGAAAATGCGGTTGGTGTTCTGTTAGAACTCACTTCATCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAATCTAATTTCTGACGACGAAAGCTTGAAATTAACGAGTGTTAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCCGTTCCGTCTGTTCATTGTCTCGAAGTAGCAATTGAGTTATTGATAAGCCTGGCTTCGAGTCCACCGATTTCTGAAGTTCTTATTTCAGATGGGTTCATTCCGAGACTTGCGGGCGTGTTACGTTGTGGTGTTCTAAGGATGAGAATTGCAGCTTCTCGAGCTGTTTATGCTCTCGGGTCCAGCACCACAAAGGCGAAGAAAGAGATGGGAGAATTTGGATGCATTACTCCATTGATACAGATGTTAGATGGCAAAGCTGTTGAAGAGAAAGAAGCAGCTGCAATGGCTTTATCAATACTCATGTTATATACAGGCAATAGAAGGATTTTCCGGAAGGATGAGAGGGGTATAGTTAGTGCAGTTCAGCTTTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCAATTTCTATTCTGCTCTCACTTGTGCATTCTAAGACTTGTAGGAAACAAATTGCAGCAGCTGGTGCTGGTGTACATACACGAAAACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGTCGTGCAAAGATATGGGAAGCTTTTTCAAGATCCTTGGGATGA 1668 0.4658 MKTTDASDPITLSDQLLSSLLGEIPTIPHFKGKWSLVTSKLHLLHSRLADFSSHFPHSSSSNSLSRDLLLSIAKTLRDAVSLVKDCQFSTLSHGKLKTQSLIDSLLATLDRYLSDSDVLLKSGILLDDAVSTTSNRDAVRSESRNLTARLQIGSSESRILAMNSFLGLLQENDKNVMIAVAQGVVPVLVRLLDTSSSEMKEKIVAAISRVSTVDNSKHALISEGLVLLNHLLRVLDHGSGFAKEKACIALQALTFSKENARAIGSRGGISSLLDICQVGTPGSQASAARVLRNLAVFPEVTENFVEENAVGVLLELTSSGTAIAQENAIGCLSNLISDDESLKLTSVKEGGIECLKNFWDSVPSVHCLEVAIELLISLASSPPISEVLISDGFIPRLAGVLRCGVLRMRIAASRAVYALGSSTTKAKKEMGEFGCITPLIQMLDGKAVEEKEAAAMALSILMLYTGNRRIFRKDERGIVSAVQLLDPSIQNLDKKYPISILLSLVHSKTCRKQIAAAGAGVHTRKLVEMNVEGSKKLLDSLGRAKIWEAFSRSLG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1758 555 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 225 IPR000225 GO:0005515
Alju13g1758 555 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 551 - -
Alju13g1758 555 Gene3D - 132 360 IPR011989 -
Alju13g1758 555 SMART arm_5 423 463 IPR000225 GO:0005515
Alju13g1758 555 SMART arm_5 381 421 IPR000225 GO:0005515
Alju13g1758 555 SMART arm_5 256 296 IPR000225 GO:0005515
Alju13g1758 555 SMART arm_5 297 337 IPR000225 GO:0005515
Alju13g1758 555 SMART arm_5 172 212 IPR000225 GO:0005515
Alju13g1758 555 SUPERFAMILY ARM repeat 104 466 IPR016024 -
Alju13g1758 555 Gene3D - 361 541 IPR011989 -
Alju13g1758 555 Pfam Armadillo/beta-catenin-like repeat 172 209 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1758 Alju-ChrAlju13 35496801 35498468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1758 129 412 U-box Gene Family AT2G23140 28.571 2.94e-17 83.2