Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1752 ATGCCCCTACTTCTCATTGCTATTTTAAATACTTGGTCTGATCTCTTTCTTTCTTGCTCATTTCCCTCACTTTCTTCTTCTCTCTTCCTCAGTGAAACAATGGACTGGAAAACATGGAACACCATAGCTATGGCTCTAGTGTTGCTTCTTCACTTGAGCTTAATTATGCCTGTCTTCTCTTTCTCGTCTCACCCAGACAGGATCCTTCGGCTTCCTGGACAACCCCACGTAGGTTTCCAACAGTACTCTGGATATGTCACAGTTGATGACAAGAAAAATAAAGCTTTATTCTACTATTTTGTTGAATCTGAAACTGACCCTGCTTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCACTTGGAGTTGGGGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGTGAAGTTCTGATTAGAAATGATTACAGCTGGAACAGAGAGGCAAATATGCTATATTTGGAGACACCAATTGGAGTGGGATTTTCTTATGCCAAGGATGGATCTTATATGACAGTGGGTGATAAGGAAACTGCCAGCGACAATCTCATGTTTCTGAAATTCTGGTTCAACAAGTTCCCTCAATACAGGCAAAGAGATCTGTTTCTTACTGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGACTTCAACAAGAAGGAAAATATATTTAACCTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACAGACTTCAACTCAAGAGCTGAGTTCTTCTGGTCTCATGGATTAATATCAGATTCAACGTACAAAATGTTCACCTCAGTGTGTAATTATTCTCGGTACGTTAGTGAGTACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTCATGAACCAAGTAAGCACAGAAACAAGTAAATTCGTGGACAAATATGATGTGACGCTTGATGTCTGTATTTCCTCTGTTCTTTCACAGTCCAAGGCCATTTGTCCTCAAACACAACTAAAAAGTGAGAGGATCGACGTATGTGTTGATGATAAAGTTATAAATTACTTGAACCGAAGAGATGTTCAAGAGGCACTTCATGCCAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACGTCCTGGAATATGATATGCTCAATCTGGAAATACCTACGCTTCCTATTGTTGGGTCAATAGTCAAAGCTGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCGGTTATTCCTCTAACTGGTAGCCGTACCTTAGTTCAGAAACTAGCAGGACAATTAGCACTAAACACTACTGTTCCTTACAGAGTTTGGTTCGAAGGCCAACAGGTTGGTGGGTGGACTCAAGGTTATGGAGATAATAAGCTGTCATTTGCAACCATAAGAGGTGCTTCCCATGAAGCTCCTTTCTCGCAGCCTGAGAGATCGCTGACTCTGTTCAAGTCTTTCTTACAAGGCAGGCCTTTACCTGCTGATATTTTCTAA 1503 0.4145 MPLLLIAILNTWSDLFLSCSFPSLSSSLFLSETMDWKTWNTIAMALVLLLHLSLIMPVFSFSSHPDRILRLPGQPHVGFQQYSGYVTVDDKKNKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIRNDYSWNREANMLYLETPIGVGFSYAKDGSYMTVGDKETASDNLMFLKFWFNKFPQYRQRDLFLTGESYAGHYVPQLAKLMIDFNKKENIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTSVCNYSRYVSEYYRDSVSPLCSKVMNQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQLKSERIDVCVDDKVINYLNRRDVQEALHAKLVGVRKWDVCSNVLEYDMLNLEIPTLPIVGSIVKAGVQVLIYSGDQDSVIPLTGSRTLVQKLAGQLALNTTVPYRVWFEGQQVGGWTQGYGDNKLSFATIRGASHEAPFSQPERSLTLFKSFLQGRPLPADIF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1752 500 Pfam Serine carboxypeptidase 73 492 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 FunFam Carboxypeptidase 392 492 - -
Alju13g1752 500 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 68 479 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 Gene3D - 392 492 - -
Alju13g1752 500 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Alju13g1752 500 Gene3D alpha/beta hydrolase 63 323 IPR029058 -
Alju13g1752 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 169 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 194 219 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 158 IPR001563 GO:0004185|GO:0006508
Alju13g1752 500 SUPERFAMILY alpha/beta-Hydrolases 70 496 IPR029058 -
Alju13g1752 500 ProSitePatterns Serine carboxypeptidases, serine active site. 208 215 IPR018202 GO:0004185
Alju13g1752 500 Gene3D - 346 381 - -
Alju13g1752 500 FunFam Carboxypeptidase 61 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1752 Alju-ChrAlju13 35441397 35444292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1752 354 495 Calmodulin-binding Proteins AT2G22960 29.577 5.95e-15 71.6