Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1698 ATGGAGACCAACCAGCAAGCCCAGTCATCTTCGTACCCACCTCAAGCCCCTGCTCCTCCTCCTCCTTTTCACCACCTTCTCCAGCAGCAGCAGCAGCAGCTTCAGATGTTCTGGTCTTACCAGCGCCAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTTCCCCTCGCTCGAATCAAGAAGATCATGAAGGCCGACGAAGACGTCCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGTGAGCTTTTCATCCTCGAGCTCACTATTCGATCTTGGCTTCACGCCGAGGAGAACAAGAGGAGGACTCTCCAGAAGAACGACATCGCCGCTGCCATCACCAGGACTGATATCTTTGATTTCTTGGTTGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGCACCACCGCCAGCGGTGTCCCTTACTATTATCCTCCCATGGGCCAACCTGCTGGCCCTCCCGGAGGCATGATTATTGGACGGCCGGCCGTGGATCCCACGGGAGTGTACGTGCAACCACCATCGCAGGCTTGGCAGTCGGTATGGCAGACAGCTGCTGAGGATGGATCATACGGTAGCGGTGGCCACAGTGGGCAGGGCAACCTTGATGGTCAGAGCTGA 660 0.5621 METNQQAQSSSYPPQAPAPPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGHSGQGNLDGQS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1698 219 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 28 151 - -
Alju13g1698 219 Gene3D Histone, subunit A 23 133 IPR009072 GO:0046982
Alju13g1698 219 Pfam Core histone H2A/H2B/H3/H4 30 118 IPR007125 GO:0003677
Alju13g1698 219 FunFam Nuclear transcription factor Y subunit gamma 24 133 - -
Alju13g1698 219 SUPERFAMILY Histone-fold 28 127 IPR009072 GO:0046982
Alju13g1698 219 MobiDBLite consensus disorder prediction 1 24 - -
Alju13g1698 219 MobiDBLite consensus disorder prediction 196 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1698 Alju-ChrAlju13 35001221 35003950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1698 23 218 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.119 1.22e-109 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju13g1698 CBFD_NFYB_HMF 2.2e-17 CL0012