Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1690 ATGGCGTCTTTTCAAGCCTCACTGCAATCCAATCACATTCATCCCACGCATATCCCCAGATGTTTCCTCGCCCAAAAACCTGTCCTCAACCTCTCATTCTCCGGCACCAATTTCCCTTCTCTCAAACTGAAATTCCCCGGCACCGCCACTAACCGTCGATCCAACGGAGCCTTTGGAGCTAAGATGGTGGCAACCGCCGCCGCTAGCTACGCCCTCGCCCTCGCCGACGTCGCCAAAGCCAACAATTCCCTCGATGCCACCACCTCCGACATCGAGAAGGTTGAGGAAGTCTTCTCCAATCCTCAGGTGTTCGACTTTTTCTCCAATCCGACTATCGATATCGAGAACAAGCGCAAGATAGTGGATGAAATTGCGACCTCCTCGAGCTTGCAGCCCCACACTCGCAACTTCCTCAACATTCTTGTGGACGCCAAGAGGATTGATCTGGTCAAGGACATAGCTAAGGAGTATGAGTTCGTCTACAACAAATTGACGAACACAGAGCTCGCCGTTGTGAGCTCGGTGGTGAAATTGGAGTCGGAGCAGTTGTCGCAGATAGCGAAGCAGGTGCAGAAGCTGACAGGGGCGAAAAATGTGAGGATTAAGACCGTGATCGATCCGAGTTTGGTGGCTGGATTCACCGTCAGGTATGGGAATTCTGGATCTAAATTGATTGACATGAGCGTGAAGAAGCAACTTGAGGATATTGCAGCTCAGCTTGATATGGGTGACATTACACTCACTGTATAA 750 0.508 MASFQASLQSNHIHPTHIPRCFLAQKPVLNLSFSGTNFPSLKLKFPGTATNRRSNGAFGAKMVATAAASYALALADVAKANNSLDATTSDIEKVEEVFSNPQVFDFFSNPTIDIENKRKIVDEIATSSSLQPHTRNFLNILVDAKRIDLVKDIAKEYEFVYNKLTNTELAVVSSVVKLESEQLSQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEDIAAQLDMGDITLTV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1690 249 Coils Coil 77 97 - -
Alju13g1690 249 Gene3D - 66 158 IPR026015 -
Alju13g1690 249 NCBIfam ATP synthase F1 subunit delta 67 240 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 199 218 IPR020781 GO:0015986|GO:0016020|GO:0046933
Alju13g1690 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 62 166 IPR026015 -
Alju13g1690 249 Hamap ATP synthase subunit delta [atpD]. 62 242 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 Pfam ATP synthase delta (OSCP) subunit 67 240 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PRINTS ATP synthase delta subunit signature 197 212 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PRINTS ATP synthase delta subunit signature 135 146 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PRINTS ATP synthase delta subunit signature 146 160 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PRINTS ATP synthase delta subunit signature 66 85 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986|GO:0046933
Alju13g1690 249 PANTHER ATP SYNTHASE DELTA CHAIN 53 241 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1690 Alju-ChrAlju13 34957420 34958169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1690 52 247 Primary Pumps ATPases AT4G09650 70.202 3.97e-99 287