Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1677 ATGGCGAACCAATCTCAAAAGAAGCCTAAACTCACCAGCGTCGATCCAAACTCCGGCTTTTGCCATTCAACCAGAATATTCCATAGCCTCCGTCCTAACTTCCCTGTTCCTCCTCCCTCACAACCTCTCTCCATCACTGACTTCGCATTCTCTCTCCTCCCATCCGCCGCTTCCTCCGCCACTGTCCTCATCGACTCCGTTACGGGCCACCACCTATCCTACTCCCTCTTCCTTCAGCAAGTCAAAAACCTCGCTTCCTCCCTTGCTTCCCTCACACCTCGCTCCAAAGGCCACGTGGCCTTCATTCTCTTGCCTTCTTCCCTGCAAATTCCCGTTCTATATTTCTCTCTGTTATCTCTAGGAATCATCATCTCACCCGCTAACCCGCTCAGCTCTGACTCGGAGGTGGCTCACCAGGTTCGACTCACTCAACCGGTGATCGCATTCGCCACCTCCTCTACCGCCCACAAGATCCCCAACCTTCAATACGGCACCGTATTGCTTGACTCCCCTCAGTTCGTCTCCATGATTAATGGAATTCCCGGAACTGATAAAAACAGGGGAAGCGACAGAGTTGAGGTGAGCCAATCCAACACGGCAGCGATTCTCTTCTCTTCGGGAACCACAGGTCGAGTCAAGGGAGTTGAGTTGACTCACAGGAATTTTATTTCACTCATTAGTGGTCTTTACCACTCGAGGCAGCTGAATATGAATGACGAAGAACGCCGTGTGTCCCTGTTTCCATTGCCTCTGTTTCACGTGTTTGGTTTTTTCATGCTGCTTTCGTCGGTGGCATCAGGGGACACCATAGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGCTGAAGGTGGTAGAGAACTACAGAATTACGAGCATGCCGGTGTCGCCGCCACTTGTGGTGGCTCTGACTAAGTCGGAGTTGGTAAACAAGTACGACCTTAGCTCGCTTAGAACTCTCGGGTGCGGTGGCGCTCCACTTGGCAAGGAGGTGGCAGAAAATTTCAAAGTCAAATTTCCTAACGTGGAGATTGGCGAGGGCTACGGTTTGACAGAGAGCTCAGGTCTAGCCACGAGAATGATAGGGCCTGAAGAGACTAAACGTCACGGTTCAGTGGGTCGACTGCACAATAAATTTGAAGCAAGAATAGTGGATACAGTGTCTGGAGAAGCATTGCCTCCTGGCAACAAAGGAGAATTATGGCTGCGAGGTCCTACAATTATGAAAGGATATGTAGGAGATGAGAATGCCACGGCTGAGACATTGGATTCAGAAGGATGGCTAAAGACCGGTGATCTTTGTTACTTTGACTCTGAAGGCTTTCTCTATGTTGTCGACAGGTTAAAAGAGCTCATTAAATACAAAGCTTATCAGGTTCCCCCAGCTGAGTTGGAACTTCTACTTCTCTCCAATCCTGAAATTGCTGATGCTGCTGTAATTCCTTATCCAGATGAAGTTGCAGGACAGATACCAATGGCCTTTGTGGTCAGAAAATCAGGAAGCAATATTAGTGCGTCTGAGATCATGGATTTTGTGGCAAAGCAGGTGGCGCCATACAAGAAAATAAGGAGGCTATCATTTGCGAACAGTATTCCAAAATCTGCATCTGGCAAAATATTGAGAAGGGAATTAGTTGCCTGTGCCCTCTCTGCTGCTTCCTCCAAATTGTGA 1671 0.4871 MANQSQKKPKLTSVDPNSGFCHSTRIFHSLRPNFPVPPPSQPLSITDFAFSLLPSAASSATVLIDSVTGHHLSYSLFLQQVKNLASSLASLTPRSKGHVAFILLPSSLQIPVLYFSLLSLGIIISPANPLSSDSEVAHQVRLTQPVIAFATSSTAHKIPNLQYGTVLLDSPQFVSMINGIPGTDKNRGSDRVEVSQSNTAAILFSSGTTGRVKGVELTHRNFISLISGLYHSRQLNMNDEERRVSLFPLPLFHVFGFFMLLSSVASGDTIVLMQRFDFEGMLKVVENYRITSMPVSPPLVVALTKSELVNKYDLSSLRTLGCGGAPLGKEVAENFKVKFPNVEIGEGYGLTESSGLATRMIGPEETKRHGSVGRLHNKFEARIVDTVSGEALPPGNKGELWLRGPTIMKGYVGDENATAETLDSEGWLKTGDLCYFDSEGFLYVVDRLKELIKYKAYQVPPAELELLLLSNPEIADAAVIPYPDEVAGQIPMAFVVRKSGSNISASEIMDFVAKQVAPYKKIRRLSFANSIPKSASGKILRRELVACALSAASSKL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1677 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Alju13g1677 556 Gene3D - 450 550 IPR045851 -
Alju13g1677 556 Gene3D - 26 449 IPR042099 -
Alju13g1677 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 545 - -
Alju13g1677 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Alju13g1677 556 SUPERFAMILY Acetyl-CoA synthetase-like 60 550 - -
Alju13g1677 556 Pfam AMP-binding enzyme 60 454 IPR000873 -
Alju13g1677 556 CDD 4CL 37 544 - -
Alju13g1677 556 FunFam 4-coumarate--CoA ligase 2 450 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1677 Alju-ChrAlju13 34855290 34858074 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1677 14 556 Monolignol Biosynthesis Gene Families AT5G63380 59.099 0.0 658