Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1674 ATGTCTTCGTCATTGAGTCCAACGATATCTTTGTCGGGTCCACCACAACTAGATATGGGTAGTCCAAACATATCCACTACAAATACACCCTTGTCATCTCATCATGATCCAGCCCGGTTTAATGCCCAAGAGCAGAGGCTGGAGTCATTATTTTATTCTCTTTTCCGTCTCTCTGAATCCACTGTCTCTGAAAGGTCCACGGTCAACGCCATCTTCGTTTCCATGGCGAACCAATATCTAGTGAAGCCTAACATCTCCGATGTGGACCTAAACTCCGGCTTTTGCCCTTTAACCAGAACATTCCATAGCCTCCGTCCTGACTTCCCTGTTCCTCCTCCCTCTCAATCTCTCTCCACCACTGACTTCGCATTCTCTCTCCTCCCGTCCGCCGCTTCCTCCGCCACTGTCCTCGTCGATTGCGTCACCGGCTACCACCTGTCTTACACTCTCTTGTTCCAGCAAGTCAAAAACCTCTCTTCCTCCCTCGCTTCCCTCACACCTCTCTCCAGAGGCCACGTGGCGTTCATTCTCTCGCCTTCTTCCCTCCACATTCCGGTTCTCTATTTCTCTCTCTTAACTCTAGGAATCATCGTCTCACCTGGTAACCCGCTCAGCTCTGACTCGGAGGTGGCTCACCAGGTTCGACTCACTCAGCCGGTGATCGCATTCGCAACCTCCTCTACCGTCAGCAAGATCCCCAACCTTCAACACGGCACCGTATTGCTTGACTCCCCTCAGTTCTTCTGCATGATTAATGGACCTCCCGGAAGTGATAATAACAGGGGAAGCGACAGAGTTGAGGTGAGTCAATCCGACACGGCGGCGATTCTCTTCTCATCGGGAACCACAGGCCGAGTCAAGGGAGTTGAGTTGACTCACAGGAATTTTATTTCACTCATAAGTGGCTTTTATCACACGAGGCACCTGGATATGAAAGACGAAGAACACCGTGTATCCTTGTTCACATTGCCACTGTTTCACGTGTATGGGTTTATCATGCTGCTTTCGTCCGTGGCAAAGGGGGACACCATAGTTCTGATGCAGAGGTTCGATTTCGAAGGGATGCTGAAGGTTGTAGAGAGATACAGAATCACGAACATGCCGGTGTCGCCGCGACTTGTGGTGGCTCTGACTAAGTCGGAGTTGGTAAACAAGTATGACCTTAGCTCGCTTCGAACTCTGGGGTGCGGTGGCGCTCCGCTTGGCAAGGAGGTGGCAGAAAATTTCAAAGTCAAATTTCCTAACGTTGAGATTGGCGAGGGCTATGGTTTGACTGAGAGCTCAGGTTTAGCAACAAGAATGATAGGGCCTGAAGAGACTAAGCGTCACGGTTCAGTGGGTCGGCTACACAATAAATTTGAAGCAAAAATAGTGGATCCTGTGTCGGGAGAAGCACTGCCTCCAGGCAACAAAGGAGAATTGTGGTTGCGAAGTCCTACGATTATGAAAGGTTATGTAGGAAATGAGAAGGCCACGGCTGAGACATTGGATTCAGAAGGATGGCTAAAGACTGGTGATCTTTGTTACTTTGACTCTGAGGGCTTCCTCTATATTGTCGACAGGTTAAAGGAGCTCATTAAATACAAAGCATATCAGGTTGCCCCAGCTGAGTTGGAACTTCTACTTCTCTCCCATCCTGAAATTGCTGATGCTGCTGTGATTCCCTACCCAGATGAAGGTGCAGGGCAGATACCAATGGCCTTTGTGGTCAGAAAATCAGGAAGCAATATTAGTGCGTTTCAGGTCATGGATTTTGTGGCAAAGCAGGTGGCGCCATACAAGAAAATAAGGAGGCTATCATTTGCGAACAGTATTCCAAAATCTGCATCTGGCAAAATATTGAGAAGGGAATTAGTTGCTCGTGCCCTCTCTGCTGCTTCCTCCAAATTGTGA 1893 0.4892 MSSSLSPTISLSGPPQLDMGSPNISTTNTPLSSHHDPARFNAQEQRLESLFYSLFRLSESTVSERSTVNAIFVSMANQYLVKPNISDVDLNSGFCPLTRTFHSLRPDFPVPPPSQSLSTTDFAFSLLPSAASSATVLVDCVTGYHLSYTLLFQQVKNLSSSLASLTPLSRGHVAFILSPSSLHIPVLYFSLLTLGIIVSPGNPLSSDSEVAHQVRLTQPVIAFATSSTVSKIPNLQHGTVLLDSPQFFCMINGPPGSDNNRGSDRVEVSQSDTAAILFSSGTTGRVKGVELTHRNFISLISGFYHTRHLDMKDEEHRVSLFTLPLFHVYGFIMLLSSVAKGDTIVLMQRFDFEGMLKVVERYRITNMPVSPRLVVALTKSELVNKYDLSSLRTLGCGGAPLGKEVAENFKVKFPNVEIGEGYGLTESSGLATRMIGPEETKRHGSVGRLHNKFEAKIVDPVSGEALPPGNKGELWLRSPTIMKGYVGNEKATAETLDSEGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVAPAELELLLLSHPEIADAAVIPYPDEGAGQIPMAFVVRKSGSNISAFQVMDFVAKQVAPYKKIRRLSFANSIPKSASGKILRRELVARALSAASSKL 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1674 630 Pfam AMP-binding enzyme C-terminal domain 537 612 IPR025110 -
Alju13g1674 630 MobiDBLite consensus disorder prediction 1 36 - -
Alju13g1674 630 Gene3D - 524 625 IPR045851 -
Alju13g1674 630 Gene3D - 103 523 IPR042099 -
Alju13g1674 630 ProSitePatterns Putative AMP-binding domain signature. 276 287 IPR020845 -
Alju13g1674 630 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 95 619 - -
Alju13g1674 630 CDD 4CL 111 618 - -
Alju13g1674 630 Pfam AMP-binding enzyme 134 528 IPR000873 -
Alju13g1674 630 SUPERFAMILY Acetyl-CoA synthetase-like 137 624 - -
Alju13g1674 630 FunFam 4-coumarate--CoA ligase 2 524 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1674 Alju-ChrAlju13 34835162 34840781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1674 88 630 Monolignol Biosynthesis Gene Families AT5G63380 59.099 0.0 650