Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1673 ATGAAACACGCCACAAACGCATCATCGGTCTACGCGTACTTTTCTACTTCTATATATTTATCTACAAAACACTATCTGAGACGCCCAATCCCGGTAAGCTTCTATCTCTCTGAACTTCCCTGCATGGCGAACCAGGTCGATCCCAGCTCAGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCTGACGTCCCTCTCCCTCTACCCTCTCAACCTCTCTCCATCGCTGACTATGCTCTTTCTCTCATCCCTCCTACCGCTTCCTCCACCACAGTCCTCATCGACTCCGCCGCCGACCGCCGCATCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCGCTTCCTCCCTCGCTTCCCTCACTCCTCTTTCTAAAGGCCACGTCGCCTTCATTCTATCCCCTGCTTCTCTTCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCATCTCACCCGCTAACCCTATCGGCTCTGAATCGGAGGTCGCTCATCAGGTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCCACTGCTCATAAGATCCCTAAGCTTCGATACGGTACCGTCATAATCGACTCTCCTCAGTTCCTTTCCTTGATCAATGGAACTTCCGGAAGTGGTAATGCTGATAACAGGGGCGTCCGAAGAGTTCAGATAAGCCAATCGGAACCGGCTGCGATTCTCTTCTCATCGGGAACAACCGGAAGAGTGAAGGGTGTGTTATTGACTCACAGGAATCTGATTGCCCTAATTGGGGGATTTTACCACCTGAAGCACCTGATGGATTCTCCAGAGAATGAACCTGATCCGGTGTCCCTATTCGCGCTGCCACTTTTCCACGTGTTTGGGTTTTTCATGCTGATTAGGGCGATATCGATGGGGGAAACTCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGTTAAAGGCGGTAGAAAGGTACAAGATTACTTACATGCCAGTTTCGCCGCCGCTCATTGTGGCGCTGGCTAAGTCGGAGTTAGTGAAAAAGTACGACCTTAGCTCGCTGTGGTTGCTAGGGTGTGGCGGCGCGCCGCTTGGCAAGGAGGTGGCCGAGAACTTTAATGACAGATTCCCTGATGTGGAAATAGTGCAGGGGTATGGCCTGACTGAAAGTGGAGGCGGGGCAACGAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACGGGAGAGTCATTGCCTCCTGGTCAGAGAGGGGAACTATGGTTGAAAGGTCCAACCATAATGAAAGGTTATGTAAGAAATGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAACATATACTTCACACCCACCCTGATATTGCTGATGCTGCCGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCGTTTGTGGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGACTTTGTGGCAAAGCAGGTTGCACCATACAAGAAGATACGACGTGTTGCTTTCATTAATGCTATACCAAAGAATCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTCGATTCTGCACTATCTAGTGGTTCCTCCAAATTGTAA 1779 0.4902 MKHATNASSVYAYFSTSIYLSTKHYLRRPIPVSFYLSELPCMANQVDPSSGFCPQTRTFHSLRPDVPLPLPSQPLSIADYALSLIPPTASSTTVLIDSAADRRISYSLFLQQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTISPANPIGSESEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSLINGTSGSGNADNRGVRRVQISQSEPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLKHLMDSPENEPDPVSLFALPLFHVFGFFMLIRAISMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVKKYDLSSLWLLGCGGAPLGKEVAENFNDRFPDVEIVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQRGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPDIADAAVVPYPDEEAGQIPMAFVVRKPGSNINADEVMDFVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1673 592 Pfam AMP-binding enzyme 92 490 IPR000873 -
Alju13g1673 592 Gene3D - 486 586 IPR045851 -
Alju13g1673 592 SUPERFAMILY Acetyl-CoA synthetase-like 100 584 - -
Alju13g1673 592 ProSitePatterns Putative AMP-binding domain signature. 236 247 IPR020845 -
Alju13g1673 592 CDD 4CL 69 580 - -
Alju13g1673 592 Gene3D - 61 485 IPR042099 -
Alju13g1673 592 FunFam 4-coumarate--CoA ligase 2 486 587 - -
Alju13g1673 592 Pfam AMP-binding enzyme C-terminal domain 499 574 IPR025110 -
Alju13g1673 592 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 52 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1673 Alju-ChrAlju13 34816752 34820774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1673 46 592 Monolignol Biosynthesis Gene Families AT5G63380 65.062 0.0 713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0527 02 3863769 3865355 Alju13g1673 13 34816752 34820774 CCT
Alju13g1673 13 34816752 34820774 Alju13g1673 13 34816752 34820774 ECH