Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1663 ATGTATCCTCCTCTTTATAGAGTCGTCAAGGATGAGATTAGTGAAGACGAAAATTCAGTACTTGGCATCAGTCTTCGACTCGCAACAATGGGTTGCCACACTTATCCTTGTACTCCCACCTCGGACAATATTGCTGCTTCCCCTTGGATCCTTCCTCGTTCTGACGATGATGAAACCAAGAGGGATATAAAAATGTTCAAGAGAACCATAAGCATGTCCGATGTTACACGTGGCGGCTACAGTAGTAGTATGAATAGCGTGCCAAGGCTTCAATTCAGAGATCACATATGGACTTACACTCAGAGGTACCTTGCAGCAGAAGCTATTGAAGAGGCAGCAAAAGAGATGATGATGATGATGGATGAAGCTGAGAAAGATGAATGTGCTGACGAAATGAGACTTGTTCAACTTCTAATTGCTTGCGCAGAAGCCGTGGCTTGTCGTGACAAATCACACGCTTCTGATTTATTATCTCAACTTGAAGCCAGTTATGCTTTAGTGTTCGGTTCTTCTTTCCAACGAGTCGCTTCTTGTTTCGTCACTGGCCTGGCTCATCGTCTTGCCATGATTCAACCTATTGGGGCTGCTGTGGAATCTAATAAACCCCCTATAATGAACATTATGGATACAGCTTCTGAAAATATGCAAGAAGCTTATAAATTAATGTACGAGATTTGCCCACATATTCAGTTTGGTCACTTTGTGGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTACTTTTCTTCATGTCGTTGACTTGGGGATGAGCCTTGCTCTGCCACATGGACACCAATGGCGAGGACTGATCCAGGGTCTCGCTAACCGCTCCGCCGCTGGCCACCCTGCTGTTCGCCGGCTTCGAATCACCGGGGTTGGACGCTGTATTGAGAGACTCCGAAGCATAGGTGAAGAACTCGAGGTTTATGCGAAAAACCATGGGATCAATCTGGAATTCTCAGCTGTTCATAAAAGCTTGGAAAATTTGCATCCTGATGATATCATAGTTTATGAGGGTGAAGTTCTTGTTGTGAACAGTGTTCTTCAGTTGCATTGTGTGGTGAAAGAAAGTCGTGGAGCTTTGAACTCTGTGCTTCAGGTGATCCATAAGCTTTCACCAAAAGTGTTTGTTATGGTTGAGCAGGACTCGAGCCATAACGGACCCTTCTTTCTTGGGAGATTTATGGACGCTCTGCATTATTACTCTGCAATTTTTGATTCACTTGATGCTGCGTTGCCTAAGTATGACACGAAGAGGGCTAAGATAGAACAGTTTTACTTTGCTGAGGAGATAAAGAACATAGTGAGCTGTGAGGGGCCGGCGAGGGTGGAGAGGCATGAGAGGCTGGAGCAGTGGCGGAGGAGGATGAGCCGGGCCGGGTTTCAGGCGGCACCGATCAAGACGGTGGCTCAGGCCAAGCAGTGGCTTCACAAGAAAGAGGTGGGTGATGGATATACGGTTGTGGAAGAGAGAGGATGCTTGGTGCTTGGTTGGAAATCAAAGCCAATTGTTGCAGTTTCTTGCTGGAAATGCTAA 1542 0.4624 MYPPLYRVVKDEISEDENSVLGISLRLATMGCHTYPCTPTSDNIAASPWILPRSDDDETKRDIKMFKRTISMSDVTRGGYSSSMNSVPRLQFRDHIWTYTQRYLAAEAIEEAAKEMMMMMDEAEKDECADEMRLVQLLIACAEAVACRDKSHASDLLSQLEASYALVFGSSFQRVASCFVTGLAHRLAMIQPIGAAVESNKPPIMNIMDTASENMQEAYKLMYEICPHIQFGHFVANSTISEAFEGQSTFLHVVDLGMSLALPHGHQWRGLIQGLANRSAAGHPAVRRLRITGVGRCIERLRSIGEELEVYAKNHGINLEFSAVHKSLENLHPDDIIVYEGEVLVVNSVLQLHCVVKESRGALNSVLQVIHKLSPKVFVMVEQDSSHNGPFFLGRFMDALHYYSAIFDSLDAALPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERLEQWRRRMSRAGFQAAPIKTVAQAKQWLHKKEVGDGYTVVEERGCLVLGWKSKPIVAVSCWKC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1663 513 Coils Coil 106 126 - -
Alju13g1663 513 Pfam GRAS domain family 134 512 IPR005202 -
Alju13g1663 513 ProSiteProfiles GRAS family profile. 125 512 IPR005202 -
Alju13g1663 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 507 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1663 Alju-ChrAlju13 34719939 34721480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1663 126 512 GRAS Transcription Factor Family AT1G14920 37.157 2.60e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju13g1663 GRAS 2e-109 CL0063