Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1657 ATGTGCAAGACTGAACCAACGGCCACGAAGCATCTACTGTCTTCTGTGTCTTCTCCCACATCAACGCTGTTGCTAATGGCGGCTGCAGCAGTAGCCGAGGCTAGGAAAGCCCCTCGACCGGGTAAGGGCGGGTTCGAAGCCCATGGCCTTTCTGAAGAGGAAGCCCGGGTTCGAGCCATTGCAGAGATCGTCAACTCTATGGTGGACCAATCCCGGAAAGGCCAGAACGTCGACTTGAATGCGCTCAAATCCGCAGCATGTCGCAAGTATGGACTTTCACGTGCACCCAAGCTAGTGGAGATGATAGCCGCCCTACCGGAGACGGAAAAAGAGGCGCTGCTGCCGAAGCTTCGAGCCAAACCTGTCCGAACCGCCTCTGGAATAGCCGTCGTGGCTGTCATGTCCAAGCCACACCGTTGCCCTCACATAGCGACTACTGGTAATATTTGCGTATACTGCCCCGGAGGGCCTGACTCGGATTTTGAGTACAGTACTCAGTCTTACACTGGTTACGAACCAACTAGTATGCGAGCAATTCGAGCTAGGTATAACCCATATGTCCAAGCTAGAAGCAGGATTGATCAGCTTAAGCGTTTGGGTCACAGTGTAGATAAGGTTGAGTTCATTTTAATGGGTGGTACTTTCATGTCCCTTCCAGCAGACTATCGTGATTTCTTTATAAGGAATCTTCATGATGCTTTGTCTGGACACACTTCTGCAAATGTTGAAGAGGCAGTTGCCTACTCTGAGCATAGTGCCACAAAATGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGGCAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTACAAAGCACATATGAGGATGTTGCTCGAGACACTAACAGAGGGCATACGGTAGCTGCTGTTGCCGATTGTTTTTGCTTGGCAAAAGATGCGGGTTTTAAGGTGGTTGCTCACATGATGCCTGATCTTCCAAATGTTGGTATTGAGAGGGATTTGGAAAGCTTTCGGGAATTTTTTGAGAGTCCCTTGTTTAGAGCAGATGGACTTAAAATATACCCTACACTTGTAATACGAGGAACTGGGCTTTACGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAGCAACTGGTGGACATCATAGCCAGGATCCTCGCCATGGTGCCTCCTTGGACTCGTGTTTATAGAGTTCAGCGAGATATTCCCATGCCTCTGGTTACTTCCGGGGTTGAGAAAGGTAATCTAAGGGAGTTAGCCTTGGCTCGAATGGAAGACCTAGGCTTGAAATGTCGTGATGTTCGGACCCGAGAAGCTGGAATCCAGGACATTCACCACCAAATCAAGCCTGAAGAGGTGGAGCTTGTGCGTCGTGATTATACAGCAAATGAAGGTTGGGAAACATTTCTGTCATATGAAGATACTCGACAGGATATTCTTGTTGGTTTGCTGCGTCTTCGAAAATGTGGTCGGAATACTACTTGTCCAGAACTTATGGGGAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCCGTTCCAGTCCATGGGCGGGATGCTGACAAGCTGCAACACCAGGGTTATGGTACACTTTTAATGGAGGAGGCAGAACGAATTGCCCGCAGGGAACATAGATCAACAAAAATAGCTGTAATATCGGGAGTAGGCACACGCCATTATTACAGGAAACTGGGGTATGAGCTTGAGGGGCCTTACATGGTGAAATATCTATCGTGA 1767 0.481 MCKTEPTATKHLLSSVSSPTSTLLLMAAAAVAEARKAPRPGKGGFEAHGLSEEEARVRAIAEIVNSMVDQSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPETEKEALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGIERDLESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1657 588 Gene3D - 439 588 - -
Alju13g1657 588 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 41 587 IPR039661 -
Alju13g1657 588 SFLD ELP3-like 78 587 IPR034687 -
Alju13g1657 588 SFLD Radical SAM 78 587 IPR007197 GO:0003824|GO:0051536
Alju13g1657 588 SUPERFAMILY Radical SAM enzymes 160 399 - -
Alju13g1657 588 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 396 583 IPR016181 -
Alju13g1657 588 CDD Radical_SAM 137 384 - -
Alju13g1657 588 NCBIfam tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 74 587 IPR034687 -
Alju13g1657 588 FunFam Elongator complex protein 3 436 588 - -
Alju13g1657 588 Pfam Radical SAM superfamily 148 342 IPR007197 GO:0003824|GO:0051536
Alju13g1657 588 Pfam Acetyltransferase (GNAT) family 440 576 IPR000182 GO:0016747
Alju13g1657 588 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 437 588 IPR000182 GO:0016747
Alju13g1657 588 Pfam Radical_SAM C-terminal domain 354 433 IPR032432 -
Alju13g1657 588 SMART MiaB 130 392 IPR006638 GO:0003824|GO:0051536
Alju13g1657 588 PIRSF HAT_Elp3 45 588 IPR034687 -
Alju13g1657 588 ProSiteProfiles Radical SAM core domain profile. 123 413 IPR007197 GO:0003824|GO:0051536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Alju13g1657 Radical_SAM 4.4e-17 CL0036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1657 13 34685746 34690980 Alju13g1657 13 34685746 34690980 ECH