Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1656 ATGAAGAAGGCCACAACAATTGCTTCAATTTTCATCATCTTAATAATGATTTCCGTTGAGATCGTCAATGTTTCTTCATCGTCACCTCTCTTACATGAAAACCAGGTTTATGAGGAATCTGCTGGTGGAAGACATAATAAAAATGAACAACAGCATGCTCACGAAGTACATTGCTCAAGAGAAAGAAGTAGGGCAGCTTCTAAAATAATTGAGGAGTATTTGGTGCCATTCATGGAACGAGAAAACTATCAGCTCCCAAAAAAGTGCAGACTTCATCCCGACAATAATATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATGGCAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGCGATGCTGTGATTTGTACCAAGACCTCTAAAACCAAGTGTAATCCAGCAGCTGCTGGGAGAAATCGTCACCTATGTGAGAGCCTTGCAGATAGTTGTTTTCCCTTAAATGGGAGTCCCTCAGCAATCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGACGCCCACACCTGCTCAGGGAAACAGAAACCCTTCGTTAGAGGTGGCAGGAAGCAAAAGAGTATCTTCTATTTGGCTGCTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATTTGATACAAAGAGATATGAGGAGTCGAACTCAAGAGCTTCGGCGCATTACAAAAGTGGGGCGAAAAACAAAACCGTCGTGA 840 0.4095 MKKATTIASIFIILIMISVEIVNVSSSSPLLHENQVYEESAGGRHNKNEQQHAHEVHCSRERSRAASKIIEEYLVPFMERENYQLPKKCRLHPDNNIFRDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHGKCLADLCGALHCDAVICTKTSKTKCNPAAAGRNRHLCESLADSCFPLNGSPSAIRLHELFLHQFCDAHTCSGKQKPFVRGGRKQKSIFYLAAGALTLVLLPVFYLFVYLIQRDMRSRTQELRRITKVGRKTKPS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1656 279 PANTHER ZINC FINGER PROTEIN-RELATED 2 278 - -
Alju13g1656 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1656 Alju-ChrAlju13 34681428 34684059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1656 34 279 C2H2 Transcription Factor Family AT5G63280 64.113 5.25e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju13g1656 None None None