Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1646 ATGACCAACCTTGTATCTTTCATTGCAAGCCTCAAAAACACTTCAGGAGTAACGACAATCGGCGTCCGGTGCAAGAAGCAGCAGCCATCATTACGCCTCGTAACAATGGCCGTCGAAACCGTCTCGCCAAACGATATTTCTCCCATCGCCGGCATCGACTACCTGAGCAGCCGGGTCTTACCTGAGCCTGATGTTTTCATTCACACATCCAGCGGCGCGCGCATTCCCACTCACACAAGCATTCTGGCTTCAGTGTCGCCGGTTTTGGAGAATATCATAGATCAGCCACGCAGGCATAGGAGCTCCGAGAGAATCATTCAAATTCACGGTGTTCCTTACGACGCCGTTACCGCTTTTCTCGGCTTCCTCTATTGTTCCAGGTGCACGGATGAGCAGATGGAGAAGTATGGGATTCATCTGCTAGCATTGTCGCACGTGTATCTGGTGGCACAACTGAAGCAGAGGTGCATCAAGGTGCTTGCCGAACGGTTAACGATCGATAATGTGGTGGATTTGCTCCAACTCGCGAGGCTCTGCGACGCGCCCGATCTTTACATCAAGTGTATGAAGCTACTCACCAATCACTTCAAATCAGTGGAAGCAACAGAGGGCTGGAAGTTCTTACAGAAGTATGATCCATGGCTCGAGCTCGAGATCCTCCAATTCATGGATGAGGACGAATCGAGGAAGAAGAAATCGAGGAAGCGGAAGGAGGAGCAGAGGTTGTACGCAGAGCTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCACAGAAGGGTGCACCGACGTTGGGCCTTACGGCGTGGAGCTCCGGAAAGAGAGTAGGCCGTGCAGCAAATACGCCACGTGTCACGGGATTCAGCTCTTAATAACGCACTTCGCTACGTGTAGCAAGAGGATGAACGGAGGGTGCTTACGCTGCAAGCGAATGTGGCAGCTCTTCCGACTTCATTCCTACATTTGCCAACAAACCCATTCTTGCAAGGTTCCTCTTTGCAGGGAAATGCAAATGAAAATGCAGCAAGTGAAAAGGAAAGATGATCCAATGTGGAAACTACTCGCGAGAAAAGTGGCCTCTGCTAGAGTCATGTCTACACTCTCTTTGCCAAAGAGGAAGAGAGACGATGAAATTAGAATAAGAATGGACAACTACGGGATTAGAGGTTTCAAATCAAAATGA 1182 0.4992 MTNLVSFIASLKNTSGVTTIGVRCKKQQPSLRLVTMAVETVSPNDISPIAGIDYLSSRVLPEPDVFIHTSSGARIPTHTSILASVSPVLENIIDQPRRHRSSERIIQIHGVPYDAVTAFLGFLYCSRCTDEQMEKYGIHLLALSHVYLVAQLKQRCIKVLAERLTIDNVVDLLQLARLCDAPDLYIKCMKLLTNHFKSVEATEGWKFLQKYDPWLELEILQFMDEDESRKKKSRKRKEEQRLYAELSEAMECLEHICTEGCTDVGPYGVELRKESRPCSKYATCHGIQLLITHFATCSKRMNGGCLRCKRMWQLFRLHSYICQQTHSCKVPLCREMQMKMQQVKRKDDPMWKLLARKVASARVMSTLSLPKRKRDDEIRIRMDNYGIRGFKSK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1646 393 ProSiteProfiles BTB domain profile. 63 132 IPR000210 GO:0005515
Alju13g1646 393 Coils Coil 229 256 - -
Alju13g1646 393 Gene3D Potassium Channel Kv1.1; Chain A 60 164 IPR011333 -
Alju13g1646 393 SMART TAZ_2 240 334 IPR000197 -
Alju13g1646 393 FunFam BTB/POZ and TAZ domain-containing protein 2 165 235 - -
Alju13g1646 393 Gene3D TAZ domain 238 344 IPR035898 -
Alju13g1646 393 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 61 374 IPR044513 -
Alju13g1646 393 SUPERFAMILY POZ domain 64 194 IPR011333 -
Alju13g1646 393 Gene3D - 165 237 - -
Alju13g1646 393 SMART BTB_4 63 164 IPR000210 GO:0005515
Alju13g1646 393 CDD BACK 165 208 - -
Alju13g1646 393 Pfam TAZ zinc finger 247 333 IPR000197 -
Alju13g1646 393 FunFam BTB/POZ and TAZ domain-containing protein 2 236 362 - -
Alju13g1646 393 Pfam BTB/POZ domain 63 162 IPR000210 GO:0005515
Alju13g1646 393 SUPERFAMILY TAZ domain 238 337 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1646 Alju-ChrAlju13 34618656 34623576 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Alju13g1646 BTB 4e-12 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1646 13 34618656 34623576 Alju13g1646 13 34618656 34623576 ECH