Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1617 ATGGAGTCCAAACCCAGAAATCTAGAACGAACCCCTATCAAGTTCCTTTGTAGCTATGGCGGGAAGATTCTTCCTCGGGCCACAGATGGCGAGCTCCGCTACGTTGGCGGCCACACTAGAGTCCTCGCTGTTGATCCTTTTATTTCCTTTTCAGAGCTGATGGCGAAGCTTGAAGAATTGAATGGTTCGTCCGTGATGTTGAGATGTCCATTGCCCAACGGAGACTTGGTGACGCTGATTTCGATAATCAACGACGAAGATCTGGCCCAAATAATTGAGGAATATGATCGAGCTTCGTCCTCGTTAGCTCATCCGCTGAAGATCAGAGCCATTCTTTCGCCGCCGAAATCGCTCAAGAAAATATCTCCGACTTCGTCTTCTCCTTCTAGTGCGAATCAATCTCCGTCCAGATCTCTCCACACCTCCACGGAGTCCTTGCCTTATTCGGTGGCCTATCGCCTTATCTGTCACAACTGCTCACCGCCGGTTGGATATCCGATCGGTATCCGTAGCGGGAGCCCTAAGTTTTGGTACGGTGGTTACTACTGCAGCAATTACTTCTATGAATTAAGTCTGGGTGTCTTTCTTTGGTGGGCTCTGAACGCGTTCAGGTGTCAAATTGCGTGTGGCTTCAAGTTTGCAGGTTCACTTCGACTCTGGTTGCTTGTGGCTGGAGGGCAACTAGTCCTCCAAGTTATGATCAACTAA 708 0.4929 MESKPRNLERTPIKFLCSYGGKILPRATDGELRYVGGHTRVLAVDPFISFSELMAKLEELNGSSVMLRCPLPNGDLVTLISIINDEDLAQIIEEYDRASSSLAHPLKIRAILSPPKSLKKISPTSSSPSSANQSPSRSLHTSTESLPYSVAYRLICHNCSPPVGYPIGIRSGSPKFWYGGYYCSNYFYELSLGVFLWWALNAFRCQIACGFKFAGSLRLWLLVAGGQLVLQVMIN 235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1617 235 Gene3D - 33 111 - -
Alju13g1617 235 Pfam PB1 domain 31 99 IPR000270 GO:0005515
Alju13g1617 235 PANTHER OS05G0427100 PROTEIN-RELATED 3 138 - -
Alju13g1617 235 SMART PB1_new 27 115 IPR000270 GO:0005515
Alju13g1617 235 MobiDBLite consensus disorder prediction 117 141 - -
Alju13g1617 235 SUPERFAMILY CAD & PB1 domains 29 120 - -
Alju13g1617 235 CDD PB1_UP2 16 112 - -
Alju13g1617 235 MobiDBLite consensus disorder prediction 118 141 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju13g1617 Alju-ChrAlju13 34438544 34439838 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1617 7 100 MAP Kinase Kinase Kinase AT5G57610 46.809 9.29e-24 97.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2507 06 52020248 52020766 Alju13g1617 13 34438544 34439838 CCT
Alju13g1617 13 34438544 34439838 Alju13g1617 13 34438544 34439838 ECH