Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1614 ATGGGTCGGCATTCGTGTTGTGTGAAGCAAAAGTTGAGGAAAGGCTTGTGGTCTCCTGAAGAAGACGAGAAGCTTTTCAACCACATCACTCGATTTGGTGTTGGCTGCTGGAGCTCCGTCCCCAAACTTGCTGGGCTCCAAAGATGTGGAAAGAGTTGTAGGTTGAGGTGGATAAACTATCTGAGGCCTGATTTGAAAAGAGGCATGTTTTCTCAACAAGAGGAGGATATCATTCTGAGTCTCCATCAAGTTCTCGGCAACAGGTGGGCACAGATAGCAGCACAGTTACCAGGAAGAACAGATAACGAAATAAAGAACTTCTGGAATTCATGCTTGAAGAAGAAGCTGATGAAGCAAGGGATTGACCCAGCCACCCACAAGCCCTTCACCCAACAGCCTCATCAGATAAAGCGGGAGCTCATAAACAATGGCTTATTAGAGACACCACCACCACCACCACCAGCAGCAGAACCAGAGCCAATACTATATCTGCAAAATATGCATCTTCATTTCTCAAGCTTACTGGCCTCCTCACAGGGACCACCTTTACTGATAAGCAGCGATTCCAGTTATTACGATTCAGCTGTTTTAACGGCAGAAGCAGCCTCCAGAGACCAAATCCTGTTGATGAGCATGAGCAATCATAATAAGCCTCACGAATGGGTCGACCCCTTGTCGTACTACGACTCATTACCGAGTCAGCATCATTTTGGAACGAGTTCAAGCTACGGGATGATGTGTTCATCAATGCCGAGTTTGACGAGTTCGGATCAGAACAACCTGTCGGCGATTACGGAATTCTCAGACAACAATAATTCGGGTTCCAAGATCACTTCAAGCAACAACAGCTCAAATATGATGGAGAATAATAATAATAATAATGGAGGGATGGTATCGTGGGAGGGATCAGAGAAGAAGATGGCGGAGGGTTCTTTTCAGTTTCATCATCAAGAGAATGGTGTAAAACCAGAGGAAGTGATGACCAACACATGTTCATCGTGGCAAGAAACAGTGCATCAGCTTCAGAATCACACTTCCGTAGATTTCAACACCTATCCGTTAACGTCGTTCTCACAAGATCTAACGGCAGCGACGTCTTATGATGTGTTCCGCCATATATGA 1122 0.4554 MGRHSCCVKQKLRKGLWSPEEDEKLFNHITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDIILSLHQVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPFTQQPHQIKRELINNGLLETPPPPPPAAEPEPILYLQNMHLHFSSLLASSQGPPLLISSDSSYYDSAVLTAEAASRDQILLMSMSNHNKPHEWVDPLSYYDSLPSQHHFGTSSSYGMMCSSMPSLTSSDQNNLSAITEFSDNNNSGSKITSSNNSSNMMENNNNNNGGMVSWEGSEKKMAEGSFQFHHQENGVKPEEVMTNTCSSWQETVHQLQNHTSVDFNTYPLTSFSQDLTAATSYDVFRHI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1614 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju13g1614 373 PANTHER MYB DOMAIN PROTEIN 55 1 313 - -
Alju13g1614 373 FunFam MYB transcription factor 11 67 - -
Alju13g1614 373 CDD SANT 70 109 IPR001005 -
Alju13g1614 373 MobiDBLite consensus disorder prediction 266 285 - -
Alju13g1614 373 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju13g1614 373 FunFam Transcription factor MYB86 69 138 - -
Alju13g1614 373 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju13g1614 373 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju13g1614 373 CDD SANT 17 61 IPR001005 -
Alju13g1614 373 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Alju13g1614 373 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju13g1614 373 SMART sant 66 114 IPR001005 -
Alju13g1614 373 SMART sant 13 63 IPR001005 -
Alju13g1614 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju13g1614 373 Gene3D - 69 140 - -
Alju13g1614 373 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1614 Alju-ChrAlju13 34410100 34411396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1614 1 132 MYB Transcription Factor Family AT1G57560 79.545 1.31e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju13g1614 Myb_DNA-binding 7.9e-13 CL0123