Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1604 ATGGATATCGACATAGGAGGACAAGTTGAGAAGGTGAATGGAAAAGAATTGGCTTATCGGGAATTTGTGAACCGGTACATGGAGAAGAACTGTCCTGTGGTGCTCAAAGGACTCATGGACGATTGGAGGGCCTGCAAGGACTGGGTCACCGTTAATGGCCAACCCAACCTTCAGTTTTTTTCTTCTCATTTTGGGAGTTCTAAAGTTCAGGTTGCAGATTGTGGCACTAGAGAATTCACGGATCAGAAAAGGGAGGAGATGCGTGTTTCAGATTTTATAAGCCGTTGGCTAGAGGGTTCTCCAGTCCAGCCTAATACTGAAAATCATAATAGTAATGGTCATGGCTCCGGACTGTATTTGAAGGACTGGCACTTTGTAAAGGAGTATCCAGAACATTTAGCATACATCACTCCGGTGTTCTTCCATGATGACTGGCTCAACTTCTATCTTGACTACTACAAAATGCATACAGAACCTGATAGTTACCAACAAAATAGTGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGGGCAAAAGGATCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCATATAGTTGGTCTGCAAATGTGTGTGGGAAGAAGAGATGGCTTTTTCTTGCTCCTCAGCAGAGTCATCTTGTATTTGACAGGAATGTGAAAAGTTGTGTGTATGATATCTTTGCTGAAGTAAGTGAATCAAAATTTCCTGGCTTTAAAAAGAGTATCTGGTTAGAATGCACGCAAGAAGCGGGTGAAATTATTTTTGTTCCGAGTGGATGGTATCATCAAGTTCATAATCTGGAGGATGCTATATCTATAAACCACAACTGGTTCAATGCCCATAACCTTTCTTGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCAAGGAATACATTGAGGACATCAAGGATATATGTGATGATTTTGAGGGTCTCTGCCAGCGCAATCTCTTTGCTAACACAGGGATGAACTTTTATGACTTCTTTACTTTCATAACGTGCTTCACCCTGGCCAATTTAGCGTTGCTTTGCTATCTAAGTGGAAAATATGGAAGCCCCCCTGAAAGCTCACTTACAATCACTCAACATTTAATTTTCAATCTTGGATCGGTGAGGAAGGTTGCAATGGAGATGAAAAGCATGCATGCCCTTGAAGGAAACCATGACTGCTTCCTGGACATTGTCAAAACATCTGAAGATCCTAGGTTCTCTAAGTTGTGCACGCATTTAAGAAAAACATATGTGACGATACACGAGCAACCTTATTTGTCTTCTGAATTTGAGAAATCTGCAGTTAATTATCTGATGGGCCTCAATGTTTTGAAAGCACGTTCTTATTCTCGGATCCACACACCTGAAGACCTAGCCAAACTTATAGACAATGCTGTTTCAGAACTTGGTGACAATTACACTCAGCAACTGTCTGCAGTACATGTCAGTTGA 1461 0.4134 MDIDIGGQVEKVNGKELAYREFVNRYMEKNCPVVLKGLMDDWRACKDWVTVNGQPNLQFFSSHFGSSKVQVADCGTREFTDQKREEMRVSDFISRWLEGSPVQPNTENHNSNGHGSGLYLKDWHFVKEYPEHLAYITPVFFHDDWLNFYLDYYKMHTEPDSYQQNSEICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKRWLFLAPQQSHLVFDRNVKSCVYDIFAEVSESKFPGFKKSIWLECTQEAGEIIFVPSGWYHQVHNLEDAISINHNWFNAHNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLFANTGMNFYDFFTFITCFTLANLALLCYLSGKYGSPPESSLTITQHLIFNLGSVRKVAMEMKSMHALEGNHDCFLDIVKTSEDPRFSKLCTHLRKTYVTIHEQPYLSSEFEKSAVNYLMGLNVLKARSYSRIHTPEDLAKLIDNAVSELGDNYTQQLSAVHVS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1604 486 Pfam Cupin-like domain 21 281 IPR041667 -
Alju13g1604 486 SMART cupin_9 118 298 IPR003347 -
Alju13g1604 486 Gene3D Cupin 2 283 - -
Alju13g1604 486 ProSiteProfiles JmjC domain profile. 126 298 IPR003347 -
Alju13g1604 486 SUPERFAMILY Clavaminate synthase-like 6 310 - -
Alju13g1604 486 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 330 - -
Alju13g1604 486 FunFam JmjC domain-containing protein 4 3 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1604 Alju-ChrAlju13 34296895 34300600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1604 7 290 Glycosyltransferase AT1G78280 25.685 9.55e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju13g1604 Cupin_8 1.8e-24 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1604 13 34296895 34300600 Alju13g1604 13 34296895 34300600 ECH