Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1584 ATGCAATTAATGCATTCTCATCCTCTCCTATTAAGGAAGATGGCTCTTGAAACGCTGAAGCTGTCTCTTACCCTCAATAACATTTCTGTTACTGTTTCTGCCATGGATCTTCACACAAATCTCAGAGATAACTCTTACACCTCACAGCCAATAATGCATAATCTTCAAGAAACTTACCTGAGGCCTAATATGAAATTAGATGAATCTCCTTTTGGGGTTCCTAATTCATCATCACAGGGTTTCTTGCAAGATTTTAATTACCACCTTGATGATGATCATCATCATAATCAGTTTCACCTTGATGGTTCTTCTTCATCAAACCCAGTTGCTGCTTTTGGGATGATCCATACTTTGAGTTTTGATTCTTTTGATAATTTTGATGTTTATGAGTGCAAGCCGTTTGTTATTGATGAGATCAATAATAGTGTGCAACATGCTCATGTTTTGGATAATTTCCAATATGAAGCTACTAATTATTGCAGCAGCTTGAACGTGCCAGGTCAGAGAAATCACCAACTCAACATGAACCATCAAACCTATGTGCCTTTCAATAATAATTCTCAGGAAACTATAAAGCCTGTGAATTTTGTTGTGCCAGATGAACGCTCCTGCATACCTCCTTCTGTGAATTATTACAGAAAAGTTGGCTTCAATAAAAAAAGTAATAGGCTATCTTCCACTAGAAGGACTAGTAGTTACAGACTTCGCAAGAAATCCAACGCTGTAAAGGGCCAATGGACCATAGAAGAAGATAGGTTGTTGATTCAATTGGTGGAACAATATGGAGTGAGAAAGTGGTCTCATATTGCTCAGATGTTGCCGGGAAGAATAGGCAAACAGTGCAGAGAGAGATGGCATAATCATCTACGACCCGACATAAAGAAGGAGACATGGACAGAAGAAGAAGACAAGGTACTGATAGAAGCTCATGGAGAGATAGGAAACAAATGGGCAGAGATAGCAAAGAGATTGCCAGGAAGAACAGAAAACTCCATTAAGAACCATTGGAATGCCACAAAGAGAAGGCAATACTCTAAGAGAAAATGTCGCTCTAAGAACCCTAAACCCTCTCTTTTACAAGATTATATCAAAAGCTTGAACTTAGACCAATACCCACCATTAGACTATCGCAAAAAATCTTCTTCTTCTAATAACAACAACACTGCAACAATCACAAATGAATCTGGAGCATCTCACTCTCATCAATTAATAGATGATCGAATATTTGTGCCGAATAATTATGGGTTTAAGGAGGCCCAAGATTTTTGCTTTGACGAGAGCTTGCTTCGAGAAGAAGATGATGATCTGGTTGGTGACAAGTTTGAAGAAACAATGGCAACAATGGTGGAGTTTGAAGAGAAGAAGAAGGAACTGGATTTGGTGGAGATGATGTCTCAGGTCAATGAAGCTGTTATTGATATGTAA 1425 0.3846 MQLMHSHPLLLRKMALETLKLSLTLNNISVTVSAMDLHTNLRDNSYTSQPIMHNLQETYLRPNMKLDESPFGVPNSSSQGFLQDFNYHLDDDHHHNQFHLDGSSSSNPVAAFGMIHTLSFDSFDNFDVYECKPFVIDEINNSVQHAHVLDNFQYEATNYCSSLNVPGQRNHQLNMNHQTYVPFNNNSQETIKPVNFVVPDERSCIPPSVNYYRKVGFNKKSNRLSSTRRTSSYRLRKKSNAVKGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKETWTEEEDKVLIEAHGEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKNPKPSLLQDYIKSLNLDQYPPLDYRKKSSSSNNNNTATITNESGASHSHQLIDDRIFVPNNYGFKEAQDFCFDESLLREEDDDLVGDKFEETMATMVEFEEKKKELDLVEMMSQVNEAVIDM 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1584 474 MobiDBLite consensus disorder prediction 339 353 - -
Alju13g1584 474 SMART sant 242 291 IPR001005 -
Alju13g1584 474 SMART sant 294 342 IPR001005 -
Alju13g1584 474 CDD SANT 246 289 IPR001005 -
Alju13g1584 474 MobiDBLite consensus disorder prediction 376 398 - -
Alju13g1584 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 293 IPR017930 -
Alju13g1584 474 PANTHER MYB PROTEIN-RELATED 218 389 - -
Alju13g1584 474 Pfam Myb-like DNA-binding domain 246 304 - -
Alju13g1584 474 Gene3D - 242 294 - -
Alju13g1584 474 FunFam Transcription factor MYB119 296 360 - -
Alju13g1584 474 Gene3D - 296 361 - -
Alju13g1584 474 FunFam Transcriptional activator Myb isoform A 242 295 - -
Alju13g1584 474 MobiDBLite consensus disorder prediction 331 356 - -
Alju13g1584 474 CDD SANT 297 340 IPR001005 -
Alju13g1584 474 ProSiteProfiles Myb-like domain profile. 290 340 IPR001005 -
Alju13g1584 474 SUPERFAMILY Homeodomain-like 241 336 IPR009057 -
Alju13g1584 474 ProSiteProfiles Myb-like domain profile. 238 289 IPR001005 -
Alju13g1584 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 294 344 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1584 Alju-ChrAlju13 34141930 34144092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1584 172 431 MYB Transcription Factor Family AT4G18770 59.023 1.49e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju13g1584 Myb_DNA-bind_6 3.6e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1584 13 34141930 34144092 Alju13g1584 13 34141930 34144092 ECH