Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1565 ATGAAGAACTTTCACAGCTTCAAACAGATTTCAACCCCAAAAAGGTCAGGAAGGAGGCTATCACTTGGGGAATACAAGCGAGCAGTGTCATGGTCCAAGTACTTAGTCTCTTCAGGGGCTGCCATTAAAGGAGAAGGAGAAGAAGAATGGAGTGCTGATCTGTCCCAGTTGTTCATTGGATCCAAATTTGCTTCTGGAAGACACAGTAAACTCTACAGAGGAATTTACAAGCATAAAGATGTGGCCATCAAGCTCATAAGCCAACCTGAGGAAGATGCAGACTTGGCTGCTTTGCTTGAAAAACAATTCACTTCTGAAGTTGCCCTTCTCTTTCGTTTGCACCATCCAAATATCATCACTTTTTATGCTGCTTGCAAGAAGCCTCCTGTGTTTTGTATAATTACCGAGTATATGGCTGGAGGATCACTGAGAAGTTATCTGCATCAGCAAAGGCCAAATTCAGTTCCACTTAATCAGGTTTTGAAATTAGCACTAGACATTGCAAAAGGGATGCAGTATCTTCATTCTGAGGGTGTGCTTCATAGGGATCTTAAATCAGAGAACTTGTTGCTTGGGGAAGATATGTGTGTGAAAGTAGCAGATTTTGGAATCTCTTGCTTAGAATCACAGATTGGTAGTGCAAAAGGATTCACAGGAACTTACCGTTGGATGGCTCCTGAGATGATAAAAGAAAAGCATCATACTAAGAAAGTAGATGTCTATAGCTTTGCCATAGTTCTATGGGAGCTCTTAACTGGACTAACTCCATTTCACAACATGACACCAGAACAAGCAGCTTTTGCAGTCTCCATCAAGAATGCAAGGCCACAATTACCAGCTGATTGTCCAAATGCATTTAGTCATCTCATAAACAGATGCTGGTCAAGCAATCCAGATAAAAGGCCACATTTTGATGAGATTATTTCTGTTTTGGAGATGTATAGTGAATCCCTTGAAGAAGATCCTGAGTTCTTCTCAACTTATAAACCACCTTCTTCTTCTTCTTTTGTGATGAGATTCTTACCAAAATGTATTACTAGTAGTCATAGATCTTCTTGA 1059 0.4032 MKNFHSFKQISTPKRSGRRLSLGEYKRAVSWSKYLVSSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSKLYRGIYKHKDVAIKLISQPEEDADLAALLEKQFTSEVALLFRLHHPNIITFYAACKKPPVFCIITEYMAGGSLRSYLHQQRPNSVPLNQVLKLALDIAKGMQYLHSEGVLHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFHNMTPEQAAFAVSIKNARPQLPADCPNAFSHLINRCWSSNPDKRPHFDEIISVLEMYSESLEEDPEFFSTYKPPSSSSFVMRFLPKCITSSHRSS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1565 352 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 SUPERFAMILY Protein kinase-like (PK-like) 46 313 IPR011009 -
Alju13g1565 352 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1565 352 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Alju13g1565 352 CDD STKc_MAP3K-like 64 311 - -
Alju13g1565 352 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 313 - -
Alju13g1565 352 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Alju13g1565 352 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Alju13g1565 352 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Alju13g1565 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Alju13g1565 352 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1565 Alju-ChrAlju13 33899057 33901407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1565 30 346 MAP Kinase Kinase Kinase AT1G62400 60.125 3.86e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju13g1565 PK_Tyr_Ser-Thr 3.6e-66 CL0016