LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g1548	ATGGAGTTCAAATACTTGTTGGTGGAATCGATTCCATTTGTAGCCATGGTGATGTTGGAGTGCTTGGATGTGGGATTGACCACATTAAGTAAAGCAGCCATGTCCAGAGGTATGAGCCACTTCGTCTTCGTCGTCTACTCAAATGCTCTTGCCTCTACCATACTCCTTCCTTCCTCTTTCATCTTCACCAGAAAAAATAGACCTCCACTTTCTCTCTCGCTTCTTTGCAAATTCTTCCTCCTCAGTCTCGCTGGGATAACTGTAATGCAGAATTGTGTTTTCACTGGTATAGACTACAGCTCGCCTACTCTTGGATCTGCTATGAGCAACTTAATTCCAGCGTTCACTTTTGTTCTTGCGGTCATCTTCAGGATGGAGAAGTTAGAGATTAGAAGCTTAAAGAGCCAGATGAAAATCTTGGGCACAGTGGTGTCCATCACAGGAGCATTAATCGTGACCCTTTACAAGGGAGCTTCCATTGGCAAATCTCCAAGTGATTCCCCTGAAAATCCTTCTCTGTCCTTGTCGGAGCAAACAAACAACTGGGCGATTGGGGGTCTCTTCCTTGCAACTGCTTGTTTATCTCTTTCAGTATGGAGCATTTCTCAGGCTGCAATTCTGAGAGGATATCCATCTGAGTTGACCATAGTGGCCTTCTATTGCCTATTTGGAACAATCCAATGCAGCATACTCTCTCTGATAGTAGTCAGAGATCCTAATGCATGGACACTTAAGCCTGACATTGAGCTCATCTCCATTATCTATTCAGCGATTTTTGGGAGTGTGGTGACATTTTCAGTGCTGACATGGTGCATCCACAAGAAAGGACCTGTATTTGTGGCCATGTTCAAGCCTGTGGGCATTGCAGTTGCTGCATTGATGGGTGTGGCCTTCCTTGGGGACACATTCCATGTTGGCAGTATCGTTGGAGCAGTAATAATTGCGATCGGGTTCTACACAGTGTTGTGGGCACAATCCAAAGAGGAAGATGAGAAGTCAAATAAAGTTCACAAGCAGCCATCATCATCATCATCATCATCACAAAGGAGACCTCTACTAGAAAGTCATATCGATGAAGCAAATATTTTAGCATAA	1095	0.442	MEFKYLLVESIPFVAMVMLECLDVGLTTLSKAAMSRGMSHFVFVVYSNALASTILLPSSFIFTRKNRPPLSLSLLCKFFLLSLAGITVMQNCVFTGIDYSSPTLGSAMSNLIPAFTFVLAVIFRMEKLEIRSLKSQMKILGTVVSITGALIVTLYKGASIGKSPSDSPENPSLSLSEQTNNWAIGGLFLATACLSLSVWSISQAAILRGYPSELTIVAFYCLFGTIQCSILSLIVVRDPNAWTLKPDIELISIIYSAIFGSVVTFSVLTWCIHKKGPVFVAMFKPVGIAVAALMGVAFLGDTFHVGSIVGAVIIAIGFYTVLWAQSKEEDEKSNKVHKQPSSSSSSSQRRPLLESHIDEANILA	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g1548	364	PANTHER	WAT1-RELATED PROTEIN	12	335	IPR030184	GO:0016020\|GO:0022857
	Alju13g1548	364	MobiDBLite	consensus disorder prediction	330	364	-	-
	Alju13g1548	364	Pfam	EamA-like transporter family	184	322	IPR000620	GO:0016020
	Alju13g1548	364	Pfam	EamA-like transporter family	25	153	IPR000620	GO:0016020
	Alju13g1548	364	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	242	327	-	-
	Alju13g1548	364	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	56	156	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g1548	Alju-ChrAlju13	33751868	33753896	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g1548	1	362	Nodulin-like Gene Family	AT3G28050	46.011	8.99e-101	300