Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1530 ATGATTGCTTTAAATCATTTCCTTTCTTCTTCCATATCAGAGACCATGGGTAGTGATGTTCTCCGGCTACAGGACCCGCCTTGCAGATCCGGCGAGCTGCATGTTCTTGCCGTCGATGACAGTTATGTCGATCGTAAGGTCATTGAGCGATTGCTGAAAATTTCTTCTTTTAAAGTGACGGTTGTAGAGAGTGGAACTAGAGCTCTTGAATATTTGGGATTGGATGGACAGAAGAAGAGCTCCATTGGATTTGAGAGTGTTAAGGTGAATCTGATAATGACGGACTATTCAATGCCGGGGATGACAGGATATGAGCTGCTTAAGAAGATCAAGGAGTCATCTATTTTTAGAGAGATTCCAGTTGTGATCATGTCATCTGAGAATATCCTGACTCGAATTGATAGATGCTTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGATGTGAAACGATTGAAAGAATTCATGATGAAGGGGGAAGGAAAGGAAAGTGGAGGAGAGAGAGAATCTCACAAAAAACGAAAGAGATCAGAAGATTTCAGTGAACTTCCACCAACACCATTATCATCTGTGTCTTGCCCTTGTGATCCATCATCTTCTTCACCATCTGCATTGTCCTCAAAGAAGTCTAGATTACTATCACAGGTTGAATAA 669 0.4215 MIALNHFLSSSISETMGSDVLRLQDPPCRSGELHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFMMKGEGKESGGERESHKKRKRSEDFSELPPTPLSSVSCPCDPSSSSPSALSSKKSRLLSQVE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1530 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 209 IPR045279 GO:0009736
Alju13g1530 222 Pfam Response regulator receiver domain 35 154 IPR001789 GO:0000160
Alju13g1530 222 MobiDBLite consensus disorder prediction 163 222 - -
Alju13g1530 222 SMART REC_2 33 158 IPR001789 GO:0000160
Alju13g1530 222 MobiDBLite consensus disorder prediction 163 186 - -
Alju13g1530 222 SUPERFAMILY CheY-like 32 157 IPR011006 -
Alju13g1530 222 Gene3D - 33 196 - -
Alju13g1530 222 CDD REC_typeA_ARR 35 157 - -
Alju13g1530 222 MobiDBLite consensus disorder prediction 188 222 - -
Alju13g1530 222 ProSiteProfiles Response regulatory domain profile. 34 162 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1530 Alju-ChrAlju13 33626707 33629480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1530 33 188 Response Regulator Gene Family AT3G48100 73.885 3.12e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju13g1530 Response_reg 6.5e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g1354 12 34712984 34714015 Alju13g1530 13 33626707 33629480 ECH
Alju13g1530 13 33626707 33629480 Alju13g1530 13 33626707 33629480 ECH