Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1525 ATGGTGGGTTCGGCAGCTCTGGCACCAGAGCCAAACTCAGAGGTATTTTCATGGCTAAAATCTCTTCCCCTGGCTCCAGAGTACCGCCCTAGCTTGGCTGAGTTCCGAGATCCGATTTCATACATTTTTAAGATCGAGAAGGAAGCTTCCAAGTATGGAATCTGCAAAATTGTTCCCCCCGTGCCACCTTCTTCGAAAAAGACAGCAATTGCGAATCTTAATCGCTCGTTGGCGTTACGAGCTGCTTCTTCTGACTCTTCTAATGCGAAATCCCAGCCTACATTCACCACAAGGCAGCAGCAGATCGGGTTCTGCCCTCGGAAGCAACGGCCCGCGCATCGTCCTGTGTGGCATAGTGGGGAATACTGCACATTTCAGGAATTTGAAGCGAAGGCCAAGGCATTTGAGAAGAACTATCTGAAGAAATGGGCTAAGAAAGGTGGTCTTACGCCTCTGGAGATAGAAACACTTTACTGGAAGGCGACAGTGGACAAACCCTTTTCGGTGGAGTACGCAAATGACATGCCTGGTTCCGCTTTTGTTCCCGTGAATGGGAAAAAATATAGAGAGGCAGGGGAGGGAATGACTCTTGGTGAGACTGCATGGAACATGAGGGGAGTGTCACGGGCAAATGGCTCTCTGTTGAAGTTTATGAGGGAGGAGATTCCAGGTGTTACATCACCGATGGTGTACTTAGCTATGCTGTTCAGCTGGTTTGCTTGGCATGCAGAGGATCATGACCTGCATAGCCTGAATTACCTTCATATGGGGGTGGGCAAGACTTGGTATGGTGTGCCGCGGGATGCCGCCGTCGCATTTGAGGAAGTGGTTAGAATTCATGGGTATGGAGGAGAAATAAATCCTCTTGTTACTTTTGCTGTTCTTGGTGAGAAGACCACAGTGATGTCACCTGAAGTATTTATTAGTGCAGGGGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACTTTTCCAAGAGCTTATCACACTGGATTTAGTCATGGATTTAATTGCGGGGAGGCAGCTAACATTGTGACACCTGAATGGTTGAGGGTTGCTAAGGATGCTGCTATTAGGAGGGCGTCAATAAATTATCCGCCCATGGTTTCGCATTTCCAGTTACTTTATGATCTTGCACTGGCTTTGTGTTCGAGAATTCCTGGGGGCATCAGTGCTGAACCACGGAGTTCTCGGCTCAAAGATAAGAGGAAAAGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAGGATGTATTACAGAACAATGACTTGCTTCATGGTCTTGGTAAAGGATCTACTATAGTACTTCTTCCTCGGAGCTCTTCAGATATTTCTGTCTGCTCAAAAGTACGTGTTGGTTCCCAGCAAATGAGGGTGAACCCTGGGTATTCTCCCAGTGCATGCAATTCTGAGGGAGTGAATTCCTCAAAAGGTTTTGTTTCTGATGACCTGGTTTTCAGCAGAACCACGCAAGTGAAAGGATTTTATTCCGTAGAAGAGAAGATTGCTTCTTTGTGTGAAAGGGTCTCCTCATTAAGTGTAAATGCATACTCTTCAAGTTCTGTGCCACTTCAAGGAGACACTGAAAGAGAGACAAGCCAAGGGGATGGGTTGTCAGGCCAGAGACTATTTTCATGTGTTACTTGTGGTATATTAAGCTTTGCATGCGTTGCTATTGTGCAGCCTAGGGAACCAGCGGCTAGGTACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTAAGCATCAATAAGTTTACACATGCCTATGGAGATGCAACTACTTCCGAGAAAAACACCTTTGCAGGACAAAAAGAAACATCAGCCCTTGGCTTATTGGCATCAGCATATGGAAATTCATCTGATTCAGAGGAAGATCAAGTTGACCCAGATGATAAATCTAATGTTATGAATCTTCCATCAGGTAGTTTATCTCAGAATATGTCTAGCTTGCCTTCTCATTTCCAAGATTGCTATGCAAGTACAGTCAAGGTTCATGGTGGTTATGGGCAAAAAGTAAACTCAGAAGGTTGTTATACCACTTCAGGGACTGCGTTTAAGAATATGAGCTGTACCTTAAATTATTCGCCAGATGTTCATGAGGTTGAAACACCAGTGCTTTGTAACACTGGATGTCCCATTGATGATGGAAGTGCTTCATTGTTGCCACATTCTGACAAAGATTCATCTAGATTGCATGTCTTCTGTCTAGAGCATGCTGCTGAAGTGGTGCAACAACTGCATCCAATAGGAGGAGCACACATATTACTTCTTTGTCATCCAGATTATCCCAAGGTAGAGGCTGAAGCCAAAAATGTGGCAGAAGAACTGGGTATTGATGTTGTATGGAAGAGTCTTGCTTACAGAAATGCCACCCCAGAAGATGAGGAGAGAATCCAGTCGGCTCTGGATAGTGAGGAAGCTATTCCTGGAAATGCAGACTGGGCTGTAAAGCTGGGAATCAATCTCTTCTATAGTGCCAATCTTAGCCGCTCTCCTCTCTACAGTAAGCAGATGCCTTATAATTCTGTCATATATTATGCATTTGGCCGTAATACTCCTGCAAGCTCACCCACAGAACCGAAGGTTTACCAAAGAAGGGCCAGCAAGCAGAAAAAGGTGGTTGCTGGAAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAGCTAAAAGAGATTCTGAGGATGACGATGAGAAAATCATACATGGGTGGTCGTTTCCTGACAAGAAAATTGAGAGATCAGAAAGTGTCCACACAGACAGTTTTACTACTAAAAAATATGCTAAGAAAAGGAAAACGACTGTAGAGAGTAGAAAAGCCAGGAAAGCCAATTTCGCTGAGAGAGAATATGTTTTGGATAATTCTATCGAAGAGAAATACAACCCACAGCAAAGGACATATTCTAGAATCAAGCAAGCCAAATATTTTGACAGAGACGATGCAGCATCAGAAGGGGGTCATTTTCCTCTGCTGCAATATCAAAAACCTACAAGAAAGCAAGCCAAATGCATAGAAAGCGATGAAGTTTCAGATGATTCAATGGATGATAATTCTAAAATGTGGCAAGGAAGGAATTTTGAGGTCAATGAACCTAAATTTGTTGACAGTGATGTTACCTCAGATGATACAATGGGATATGATTCTGATTCACAACTTAGGAGAGAGCTTAGCAACGAACAGATTGAAGACTCAGAAAGAGATGGAATTTCAGAGGATTCTATTGGTGGTAGTTCTCTTAAGCGGAAGAGGAAGCCTTGTAAAATAAAGCCAGCCAAATGTGTTGCTAAAGATGTAATTTCTGATGAGCAAATGGAGGATCATTTTCAGAATCAGCAAAGAATTCCTAAAAGCAGACCAGCCAAATACTTTGTTGGAGAAGGTATCATGGTATCTGGTGATCAACTAGAGGGCCGAATACATAAGCAGCAAAGATCTAAAGGCAGGCGAGCCAAATTCATCGCTAGAGAGAATATTACATCTGATGACCAACTGGAGGACCATTCTGGCAAGTGCCACAGAAGGATTCCTAAAAGCAGACAAGGTAAATGCCTAGTTAAGGAAGATGTAGAGTCTGATGACCAATTGGAGGATCACTTTGAGAAGCCATGTGGTACTATTCCAAAGAGCAGGCAAAATAAACGCAAGAATAAAGTTATGGTTGGCTCATCTGATAACTATTCTCATCTGCTGCATAGAACTCCTAAGAGGAAGCAAGTTAAAAGGATGGGTGAAGAAGACATAAATTCTGATGATCAAATGGTGGATTCGTCTCGTCAGCAGCGAAGGAGGATTCTTCGAAGCCAGCAATCTAAATTAGAGACACGGCAAGAAATGAAACAATCTAACACTTGCCGTGTGAAAGAACAGACTTGCCGGCCTAAGCAAAGTGCTCAGCTGCTAGTGAAATCTAAGACCTCTCAGAAAATGAAGCAGCCTCCTCGAGTGCAGAAAAATCAACCTAAAAACTTGACAGATTTTAACTTAAGTTCAGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGTACCAAAAGTTGAGGAGTCGGAAGCAAAACCAAAAGGAAAGGTAACCCAAAGGAAGAAGGCGAACAAGGCTACAGGTTTGAAGGTTTCCAAATTGAAGGACGAGGAAGCAGAATATGAGTGTAATATTGATGGGTGCACTATGAGATTTGGCTCAAAACAGGAGCTAGGAGTGCACAAGAGAAACATTTGTCCTGTAAAGGGATGTGGAAAGAAATTTTTCTCACATAAATATCTGGTGCAGCACCGTCGAGTCCACGTTGATGACCGCCCTCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACCTTCAAGTGGGCGTGGGCACGTACCGAGCATATTCGAGTGCATACCGGTGCTCGTCCATACGTCTGTGCTGAGCCAGGATGTGGACAAACATTCAGATTTGTTTCTGATTTCAGCCGCCACAAGCGAAAGACCGGCCATTCAACAAGGAAGAGTCGTTAA 4548 0.4387 MVGSAALAPEPNSEVFSWLKSLPLAPEYRPSLAEFRDPISYIFKIEKEASKYGICKIVPPVPPSSKKTAIANLNRSLALRAASSDSSNAKSQPTFTTRQQQIGFCPRKQRPAHRPVWHSGEYCTFQEFEAKAKAFEKNYLKKWAKKGGLTPLEIETLYWKATVDKPFSVEYANDMPGSAFVPVNGKKYREAGEGMTLGETAWNMRGVSRANGSLLKFMREEIPGVTSPMVYLAMLFSWFAWHAEDHDLHSLNYLHMGVGKTWYGVPRDAAVAFEEVVRIHGYGGEINPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIVTPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGGISAEPRSSRLKDKRKSEGETVIKELFVQDVLQNNDLLHGLGKGSTIVLLPRSSSDISVCSKVRVGSQQMRVNPGYSPSACNSEGVNSSKGFVSDDLVFSRTTQVKGFYSVEEKIASLCERVSSLSVNAYSSSSVPLQGDTERETSQGDGLSGQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGVSINKFTHAYGDATTSEKNTFAGQKETSALGLLASAYGNSSDSEEDQVDPDDKSNVMNLPSGSLSQNMSSLPSHFQDCYASTVKVHGGYGQKVNSEGCYTTSGTAFKNMSCTLNYSPDVHEVETPVLCNTGCPIDDGSASLLPHSDKDSSRLHVFCLEHAAEVVQQLHPIGGAHILLLCHPDYPKVEAEAKNVAEELGIDVVWKSLAYRNATPEDEERIQSALDSEEAIPGNADWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGRNTPASSPTEPKVYQRRASKQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDDDEKIIHGWSFPDKKIERSESVHTDSFTTKKYAKKRKTTVESRKARKANFAEREYVLDNSIEEKYNPQQRTYSRIKQAKYFDRDDAASEGGHFPLLQYQKPTRKQAKCIESDEVSDDSMDDNSKMWQGRNFEVNEPKFVDSDVTSDDTMGYDSDSQLRRELSNEQIEDSERDGISEDSIGGSSLKRKRKPCKIKPAKCVAKDVISDEQMEDHFQNQQRIPKSRPAKYFVGEGIMVSGDQLEGRIHKQQRSKGRRAKFIARENITSDDQLEDHSGKCHRRIPKSRQGKCLVKEDVESDDQLEDHFEKPCGTIPKSRQNKRKNKVMVGSSDNYSHLLHRTPKRKQVKRMGEEDINSDDQMVDSSRQQRRRILRSQQSKLETRQEMKQSNTCRVKEQTCRPKQSAQLLVKSKTSQKMKQPPRVQKNQPKNLTDFNLSSEEEEEGGPSTRLRKRVPKVEESEAKPKGKVTQRKKANKATGLKVSKLKDEEAEYECNIDGCTMRFGSKQELGVHKRNICPVKGCGKKFFSHKYLVQHRRVHVDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTRKSR 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1072 1099 - -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1206 1384 - -
Alju13g1525 1515 SUPERFAMILY beta-beta-alpha zinc fingers 1421 1459 IPR036236 -
Alju13g1525 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1485 1509 IPR013087 -
Alju13g1525 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1483 1514 IPR013087 -
Alju13g1525 1515 SMART JmjN_1 24 65 IPR003349 -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1350 1376 - -
Alju13g1525 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1425 1447 IPR013087 -
Alju13g1525 1515 SUPERFAMILY Clavaminate synthase-like 169 379 - -
Alju13g1525 1515 Pfam jmjN domain 26 59 IPR003349 -
Alju13g1525 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1453 1482 IPR013087 -
Alju13g1525 1515 SUPERFAMILY beta-beta-alpha zinc fingers 1463 1506 IPR036236 -
Alju13g1525 1515 SMART c2h2final6 1483 1509 IPR013087 -
Alju13g1525 1515 SMART c2h2final6 1400 1422 IPR013087 -
Alju13g1525 1515 SMART c2h2final6 1423 1447 IPR013087 -
Alju13g1525 1515 SMART c2h2final6 1453 1477 IPR013087 -
Alju13g1525 1515 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Alju13g1525 1515 SMART cupin_9 196 365 IPR003347 -
Alju13g1525 1515 FunFam Probable lysine-specific demethylase ELF6 1480 1509 - -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1299 1342 - -
Alju13g1525 1515 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Alju13g1525 1515 ProSiteProfiles Zinc finger C2H2 type domain profile. 1423 1452 IPR013087 -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1072 1086 - -
Alju13g1525 1515 ProSitePatterns Zinc finger C2H2 type domain signature. 1455 1477 IPR013087 -
Alju13g1525 1515 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Alju13g1525 1515 FunFam Probable lysine-specific demethylase ELF6 1450 1479 - -
Alju13g1525 1515 Gene3D Cupin 18 369 - -
Alju13g1525 1515 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1449 - -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1254 1298 - -
Alju13g1525 1515 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Alju13g1525 1515 Gene3D Classic Zinc Finger 1421 1507 - -
Alju13g1525 1515 MobiDBLite consensus disorder prediction 1206 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1525 Alju-ChrAlju13 33600939 33608018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1525 1060 1514 C2H2 Transcription Factor Family AT3G48430 36.978 2.35e-66 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju13g1525 JmjC 7.2e-34 CL0029