Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1516 ATGGTGACGATGGGCAATGGAGCCATTATTGAGGAGTTCCACTCTGATCGCTTCTCGGAATCACTCTCAGCACTTTGTATCAATTATTATTATTATTGTCACCTTGATCGATCGTCTTCCCGCGTTTGTCTCAGTCCGTCTAAACGTCTTTCTCTTCCGTTTTGTGATTACGGCCCCAAGAAACTAACCAGTAACAAAAAAATGGTGTCCACATATCAGAAGAAAAGCCTCCACTCACTCCTTGCTGCAAACCTTGGCAAGCTCACCATACCTTCTTCTTCTTCTTCATCCGCCGCTCACCATGATTTCGACTTTCCACCTTTCTCTTCTCACGATCTCAATCCATCTCCATCCACTTCTGCCATTCCTGGTAGCCCACAGGTTATTCAGAGTAGGTCCCACTCCCTTGTGGGACCCTCCCCACGATTCGCCCAATCCTCTAATTCCCTGGCGTTTGTTGATGAACTCGATTCCCAGAGCGATGACGAGGCTGAAATTGATGTCGGAGGTGGGTTAGGAACTGACTGTGGAGTTGGTGAAAAGCAAGTGGGTGTGAGTGATTCTGGAGAGAAATTGGTGGTCAAAATTGGACCTGGTGATTTTCAAATTTTGAGAGTTGTAGGGCAAGGAGCGTTCGGGAAGGTTTTTCAGGTAAGGAAAAAGAGTGACCGTTTGGACGGAGACGGTGGTGGTGGTGATGGAATTTTCGCAATGAAGGTGATGCGGAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCTGAGAGGGATATTCTCACTAAAGTAGTTCATCCTTTTATTGTTCAGCTACGCTACTCTTTTCAGACTAAATCTAAATTATATTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATCGGCAGGGTTTCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCCCATCTTCACAAGTGTGGAATCGTGCATCGGGATCTTAAACCTGAAAATATACTCATGGATGCGGACGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGAAGATCTAACTCTTTATGTGGGACCATGGAATATATGGCTCCAGAAATCTTACTGGCTAAAGGCCACAACAAGGAGGCAGATTGGTGGAGCATTGGTATACTGTTGTATGAAATGCTAACAGGGAAGGCCCCATTTACACACGCTAATAGAAAGAAACTTCAAGAGAAAATTACTAAAGAGAAAGTGAAACTTCCACCAATGCTTACCGGTGAAGCTCACTCTTTGCTTAAAGCATTACTGCAAAAGGATCCATCAAAAAGGCTGGGCAATGGACCAAATGGGGACAACCAGATTAAAAGTCACAAGTGGTTTCGCTCGATCAAATGGAAGAAACTGGAGGCAAAAGAACTGCAGCCAAAATTCATACCAGATGTGAGTGGCTTAGACTGTACAGCCAATTTTGATCAATGCTGGACCTCAATGTCTCCGGTTGATTCACCAGCACCCACACCTACAGCTTCTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTAAGCTAGACTGA 1611 0.442 MVTMGNGAIIEEFHSDRFSESLSALCINYYYYCHLDRSSSRVCLSPSKRLSLPFCDYGPKKLTSNKKMVSTYQKKSLHSLLAANLGKLTIPSSSSSSAAHHDFDFPPFSSHDLNPSPSTSAIPGSPQVIQSRSHSLVGPSPRFAQSSNSLAFVDELDSQSDDEAEIDVGGGLGTDCGVGEKQVGVSDSGEKLVVKIGPGDFQILRVVGQGAFGKVFQVRKKSDRLDGDGGGGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGFFSEDQARLYTAEIVSAVSHLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTMEYMAPEILLAKGHNKEADWWSIGILLYEMLTGKAPFTHANRKKLQEKITKEKVKLPPMLTGEAHSLLKALLQKDPSKRLGNGPNGDNQIKSHKWFRSIKWKKLEAKELQPKFIPDVSGLDCTANFDQCWTSMSPVDSPAPTPTASDHFQGYTYVAPNPWLSSKLD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1516 536 PANTHER RIBOSOMAL PROTEIN S6 KINASE 121 528 - -
Alju13g1516 536 MobiDBLite consensus disorder prediction 114 140 - -
Alju13g1516 536 Gene3D Phosphorylase Kinase; domain 1 200 510 - -
Alju13g1516 536 Pfam Protein kinase domain 201 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1516 536 FunFam Non-specific serine/threonine protein kinase 290 485 - -
Alju13g1516 536 SUPERFAMILY Protein kinase-like (PK-like) 199 528 IPR011009 -
Alju13g1516 536 ProSiteProfiles Protein kinase domain profile. 201 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1516 536 SMART pkinase_C_6 467 526 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju13g1516 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 467 534 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju13g1516 536 SMART serkin_6 201 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1516 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Alju13g1516 536 Gene3D Transferase(Phosphotransferase) domain 1 290 485 - -
Alju13g1516 536 FunFam Non-specific serine/threonine protein kinase 199 314 - -
Alju13g1516 536 ProSitePatterns Protein kinases ATP-binding region signature. 207 239 IPR017441 GO:0005524
Alju13g1516 536 Pfam Protein kinase C terminal domain 487 524 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1516 Alju-ChrAlju13 33560456 33563847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1516 126 527 AGC Kinase Gene Family AT3G08720 60.784 7.62e-173 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Alju13g1516 Pkinase 2.8e-71 CL0016