Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1511 ATGGTGAGGCCTCCATGCTGTGAGAAGCTCAGTGCTAAAAAAGGTGTTTGGACTCCAGAAGAAGATGCAGAGATGATGGCATATGTCTCAAAGCATGGATCTGGTAACTGGACTTCTTCCTTTCCCAAAAAAACAGGTTTTAAGAGGTGTGGGAAAAGTTGCAGGCTCAAGTGGACTAATTACCTGAGGCCAGATCTTAAGAAAGATAGCTTCACACCCCAAGAAGAGGATTTAATTCTTAAGCTTCACGCAGCCATTGGAAGCAGGTGGCCTATGATTGCCCAACAACTTCCTGGGAGAACAGACAACGATGTAAAGAATTACTGGAACACAAAGCTGAAGAAGAAGCTCACTGAGATGGGAATAGACCCTATCACACACAAGCCCTTCTCTAAACTCCTAGCTGACTATGGAAACATTGGAGGCATCCAGAAACCAAACACCCGCATTGGGTCTCTCAGTAAAGACCTGAAGAACACAGTATTGTTCAGATCAGACCCATTTCCTAAGCTACCTTCAACTTCACCAAAACTGGAACCACCAACAGAAAGTTGCAGCTTTTTCAGTAACAGAGACATGGTGATGGAGAAGGAGACAATCCCAGCAACTATATTTGGGGAAGCCTTCTTATGGTCGTCATCAATTTCATCAACATCTTCTTCTTTTTGTTCCAATGCTGCTCAAGAAGAAGGCTTGTCTTTACCCTTTTGTTGGAATGATTTTCTTCTAGAAGATGTTTTCCCACCACCACCACCTGCTGCTGACGACAACCCAGAGAATGAAAATCCGACAACCAACGAGAATAAGAATGAGGTGACGTCACAGAAAGTCCCCACCAGCAGTAGTAGTGACGTTCGTTATTCAACGTCATCCTCTGAGATCTCTTTCGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTCTTGAATTTCCCTCACCTAATGGAGGAACCTTCCCCGTCCAACTACTGA 972 0.4414 MVRPPCCEKLSAKKGVWTPEEDAEMMAYVSKHGSGNWTSSFPKKTGFKRCGKSCRLKWTNYLRPDLKKDSFTPQEEDLILKLHAAIGSRWPMIAQQLPGRTDNDVKNYWNTKLKKKLTEMGIDPITHKPFSKLLADYGNIGGIQKPNTRIGSLSKDLKNTVLFRSDPFPKLPSTSPKLEPPTESCSFFSNRDMVMEKETIPATIFGEAFLWSSSISSTSSSFCSNAAQEEGLSLPFCWNDFLLEDVFPPPPPAADDNPENENPTTNENKNEVTSQKVPTSSSSDVRYSTSSSEISFVEAMLDQENEMFLNFPHLMEEPSPSNY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1511 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 62 IPR017930 -
Alju13g1511 323 MobiDBLite consensus disorder prediction 258 289 - -
Alju13g1511 323 FunFam Transcription factor RAX3 7 68 - -
Alju13g1511 323 Gene3D - 12 68 - -
Alju13g1511 323 PANTHER F14D16.11-RELATED 1 318 - -
Alju13g1511 323 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Alju13g1511 323 Gene3D - 69 129 - -
Alju13g1511 323 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju13g1511 323 FunFam Os07g0634900 protein 70 129 - -
Alju13g1511 323 SMART sant 13 64 IPR001005 -
Alju13g1511 323 SMART sant 67 115 IPR001005 -
Alju13g1511 323 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Alju13g1511 323 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Alju13g1511 323 MobiDBLite consensus disorder prediction 248 289 - -
Alju13g1511 323 CDD SANT 70 113 IPR001005 -
Alju13g1511 323 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Alju13g1511 323 CDD SANT 17 62 IPR001005 -
Alju13g1511 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1511 Alju-ChrAlju13 33532207 33534329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1511 1 317 MYB Transcription Factor Family AT3G28470 42.988 5.44e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju13g1511 Myb_DNA-binding 5.1e-10 CL0123