Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1508 ATGTCCGAAGGATCCCCCTCTCCTCCTCAGATTTCCGGCGAACCCGGTCACCGATCCTCGCCGGCACCAAATTCCGAAAACCACGTCCCTGATTCTCAAAACGGGGTTGCCACTTCTAAGGAAGAAACGCCAGCCGCTCCTACGACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCTGCCTCTCGTCTCTATTCATCGGTGCAGCCGGCGATCCAACGGAAGTCCAAAGAGGCGAAGAAGGAGGAGAAGCAGGAAAACTCGCCGCAGCAGCAATGCAGCAAGATCGTGACGCCATTAGTAGAACCGCCTCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTCAATTTCTTGCATGTATTTAGGCCTCTCTTAAACATCTCAGTAGAATTCTCGGCTGAAGAATTCGAGACAGCTCTCCTTATGCCCAATGATACATTAAGTGATATACATATGCCGCTGTTAAAGGCAATCCCTCCCATCACAAGAATGGCACTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGCGATGTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGCATATAAATCACTTGATCCTGGGGTCCGTGTTGTCATCTTAAAAGCTTTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATCGACAACTCACTCAGACATGGCGTTCAACTATCAACATTTCGAAAAGAGCGTATTGGGGGTGATTCTCATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATATCGTGAAACAAGGAAAACTGAAGTAGTTCAAGTGAAGAAGGGGAAGGCAAAAGGTTCAAAGGTTCTTTCTAATACATCATATCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTGCTCGAGTAAAAATAGAACTGAGTCTTCTCTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGAGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGAGTTGATGGCCTTGCTACTGGGCGTTCACTTCGTGATAGGAAGCCTGTTACTTACACATTTGATGATTATGATCGGTCCATCAATGAGGCCATTAAAGTAACCAAACAAAAACAGCCATCTCCAGAACCTGCGTTTAGGAGAGAAATGGTGGGAAAGCATGAAACATTGAGTAATGGTAGACGGAGTGGTCCTTCACATACCTCAGAACATCTGAATTTTAGCATGCCATCTCCGAAGTCACCTGACTTTGATGATGCTGAGGAAGAGCACAAATCTGAATTATTGGACCGAAGCATTCGACGAAGACAGAGGCCTTTGCGGTACTCACAGAAAGAATTTGTTGAAGCATTATCTGATAACGATGCAGACTATGACAGCGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAGTATCTCAGGAAACGTAAGCAGAGAAGGAACCATTCTAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGATGAAGACAATGTTGAAGAAGAAGATGAGGATGATGAAGATTCCTTGAGCATCAGTGAAGACAGTGATAAGCCTCGGAAATCCAGGCAATTGCCAGGTCGTACTAGGAGAGAAACTAAACTCAGGTCTGTAGATGAGATTAACATTGGTTTACGACGCAGCAAGAGGGCCACCAGAAACCGTATCAACTATCGTCAATATGATATGTCAGAATCAGAGCCAGAGTGTACGAAACCTGAGAAGTCTAATGCTTCAGACAATCACTCAGGTCCCAGCGAAAATGGGGATTATGTGATGGAAGATGAAGATTCAGATGACAATGATGGCGAAGATCAGGAAGCAAAAGAAGATAATGAGCCCCATGCTAATGTTGCAGAGGAAGAGAAAGAAGAACAAAAACAACCTCCTGAAAAGTCAGATAGTCCTAATCAGGAGGAAGGCGAGGGCACAAAAAAAAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTACCTCTGGTTTTGACGATGTTGTAAACACGATGATGAAAGATGAGGAAAATGATGTTAAAGCTTCCCCCCCTTCATGA 2193 0.4473 MSEGSPSPPQISGEPGHRSSPAPNSENHVPDSQNGVATSKEETPAAPTTTRSNRPSRACTIRAASRLYSSVQPAIQRKSKEAKKEEKQENSPQQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGDVPIVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYRETRKTEVVQVKKGKAKGSKVLSNTSYQWEAVATNFDEFQDVSEKLCSSKNRTESSLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPEPAFRREMVGKHETLSNGRRSGPSHTSEHLNFSMPSPKSPDFDDAEEEHKSELLDRSIRRRQRPLRYSQKEFVEALSDNDADYDSDDDIVGEAVYDEEYLRKRKQRRNHSSSSEGDDEYQWDEDNVEEEDEDDEDSLSISEDSDKPRKSRQLPGRTRRETKLRSVDEINIGLRRSKRATRNRINYRQYDMSESEPECTKPEKSNASDNHSGPSENGDYVMEDEDSDDNDGEDQEAKEDNEPHANVAEEEKEEQKQPPEKSDSPNQEEGEGTKKRRFLDLNELAPTSGFDDVVNTMMKDEENDVKASPPS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1508 730 MobiDBLite consensus disorder prediction 608 624 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 434 477 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 561 595 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 77 91 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 523 537 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 1 76 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 1 108 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 656 700 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 714 730 - -
Alju13g1508 730 PANTHER REMODELING AND SPACING FACTOR 1 50 686 IPR028938 GO:0006355|GO:0031213
Alju13g1508 730 MobiDBLite consensus disorder prediction 461 477 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 438 455 - -
Alju13g1508 730 Pfam DDT domain 125 170 IPR018501 -
Alju13g1508 730 MobiDBLite consensus disorder prediction 538 560 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 638 655 - -
Alju13g1508 730 MobiDBLite consensus disorder prediction 523 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1508 Alju-ChrAlju13 33504360 33511877 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Alju13g1508 DDT 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2633 06 53334054 53340646 Alju13g1508 13 33504360 33511877 CCT