Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1500 ATGAATTTTGATACGTCCAGGCATTATTTGAGTTGGTTGTTGTGGAACAACATGACCCTTAAAGGTGGCACAAAGCAGGCCTGTGCAGCCTGCAAATTTCAGAGAAGAAAGTGTACCCCAGAATGTGTTCTCGCTCCTTACTTCCCTGCCGATCAACCCAAGGCGTTTCAGAATGTCCACAAGCTATTTGGAGTCAGCAACGTTGAGAAGATACTCAAGACCTTGGACCCTAGCCAGAAGAAAATAGCCATGGAATCCATCATTTGCCAAGCTAATTACAGAGATAAATACCCTGTTCACGGCTGCTGTGAGGAGATTTGCAGGCTTAATTACCAAATATGGTACGTTGAAGAAGAGCTTCGTGCTGTTCATCAGCAACTTGAGATTTGCAGACAGCATTTTTTGCAGCAGCACCAAGGTTGTTCTTCATCTTTAATGCTCGATGATGTCACTTCACCGTTAGAGTTGGGGATGACGACGACGACACCTCGTAATAATTATGCACTACCACTCTTAAACCATAATCCTCTGATTATAAGACCAGAGACATATAATTCAAAGCTTGTTTTGCCTGCAGTTTCCGACCAACATTCTTACTGTAACAGCAATAGTTCTGTGGGTTACAACTCCATGGATGTGGAATCTAAGGATCATGTTGTTACACCAAATAGCTTGTGGGTCCACCAGAATCCCTGCCAAGATGATGATGGAGATTCCATGGCCATGGCCATGAATTCCCAGTTACAGTTGGTTGCCTCGCCGCCACTGGACATGGAACAAAAAGTTGTCGGAGAATATTACGATGAGATTACTCCACTTTTTTGA 825 0.4376 MNFDTSRHYLSWLLWNNMTLKGGTKQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNVEKILKTLDPSQKKIAMESIICQANYRDKYPVHGCCEEICRLNYQIWYVEEELRAVHQQLEICRQHFLQQHQGCSSSLMLDDVTSPLELGMTTTTPRNNYALPLLNHNPLIIRPETYNSKLVLPAVSDQHSYCNSNSSVGYNSMDVESKDHVVTPNSLWVHQNPCQDDDGDSMAMAMNSQLQLVASPPLDMEQKVVGEYYDEITPLF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1500 274 ProSiteProfiles LOB domain profile. 26 127 IPR004883 -
Alju13g1500 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 190 - -
Alju13g1500 274 Pfam Lateral organ boundaries (LOB) domain 27 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1500 Alju-ChrAlju13 33468935 33470959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1500 18 131 AS2 family AT3G47870 61.404 1.20e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju13g1500 LOB 4.8e-34 No_clan