Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1497 ATGAATTTTGAAACCGGCCTTGCCTTTTCTCTCCCTCCCTCCCTCCCTCCCTTCTCTCCGCCGGAGGACAGCCGGCGCCGCCGTCCCCATCTACTCTCAGCGAAACACGAAAACCCTATTTTATCGCGAAAAGAAAATCAGGAGGGACGACTGTGCGCTTTGAAGTTCGAAATCAGTATGGGAAATTGCTGCGTGAAAGCGGACGTCGTAGAAGACAAGCCCAACCACCACTCTAACCAGGTAGCCAAGAAGAAAAACAAGGAAGGAAGACCGAATCCATTTTCAGAAGAACCTATCCATGCGACGGCTCCGATCCGGGTCTTGAAGGACGTGATTCCACTGAGTCACCGAACCCGAATCAGCGACAAGTACGTACTAGGTCGAGAGCTGGGTCGAGGAGAGTTTGGGATCACCTACCTCTGTACGGACCGAGAGACGAAGGAAGCACTAGCTTGTAAGTCGATTTCGAAGCGGAAGCTGAGGACGGCGGTGGATATTGAGGATGTGAGGCGCGAGGTTGCTATAATGTCCACTTTACCGGATCATCCTAACATCGTGAAGCTGAAGGCTACCTACGAGGACAACGAAAACGTGCACCTTGTGATGGAGCTGTGCGAGGGCGGCGAGCTTTTTGATCGGATTGTGGCTAGAGGACATTACAGCGAACGAGCGGCGGCGAACGTGGCCAGAACAATTGCAGAGGTTGTAAGGATGTGCCATGCCAACGGGGTTATGCATAGGGACCTGAAGCCTGAGAACTTCCTTTTCGCCAATAAGAAAGAGAATTCTGCCCTCAAAGCCATCGATTTTGGGCTCTCTATCTTTTTCAAGCCTGGAGAGAAGTTCTCGGAGATTGTTGGGAGTCCTTACTATATGGCGCCGGAGGTTTTGAGGAGGAATTACGGACCAGAGGTTGACGTATGGAGCGCCGGAGTGATTCTTTATATATTGTTATGTGGGGTTCCTCCATTTTGGGCAGAAAGTGAACAAGGCGTTGCTTTGGCGATCCTGAGGGGCGTAATTGACTTCAAGAGGGAACCTTGGCCTCAGATTTCGGATAGTGCTAAAAGCCTGGTACGACAGATGCTGGAACCAGATCCTAAAAAGCGCTTAACAGCTGAGCAAGTGCTTGAACATCCCTGGCTACATAATGCAAAGAAAGCTCCAAATGTTCCACTAGGAGATATTGTGAGGGCAAGGCTTAAGCAGTTCTCTGTGATGAATAGATTCAAAAAGAAAGCCCTCAGGGTAATTGCTGAACATTTATCTGTTGAAGAGGTAGAAATAATGAAGGATATGTTCACATTGATGGATGTTGACAAAGATGGCAAAGTAACATATGAGGAACTCAAGGCCGGGTTGCAGAAGGTTGGTTCACAATTGGCTGAGCCCGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAACGGAGTACTAGACTATGGAGAGTTTGTAGCTGTGACAATTCACCTGCAGAAAATGGAGAATGATGAGCATATCCGCAAAGCATTCATGTTCTTTGACAAAGATGGCAGTGGGTATATTGAGTTAGATGAGCTTCGTGAAGCATTAACTGATGAGTCAGGTGAGACTGAAGCTGATGTATTGAAAGACATTATGCGCGAGGTTGACACGGACAAGGATGGCCGGATTAGTTATGAGGAGTTTGTGGCCATGATGAAAACTGGAACCGACTGGAGAAAAGCATCAAGGCAATATTCCAGGGAGAGATTCAAGAGTCTGAGCCTAAACTTGATGAAGGATGGTTCGCTTCATCTTCATGATGGGATTAGTGGCGAATCCGTGGTGGTTTGA 1821 0.4816 MNFETGLAFSLPPSLPPFSPPEDSRRRRPHLLSAKHENPILSRKENQEGRLCALKFEISMGNCCVKADVVEDKPNHHSNQVAKKKNKEGRPNPFSEEPIHATAPIRVLKDVIPLSHRTRISDKYVLGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPDHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAANVARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSALKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLRRNYGPEVDVWSAGVILYILLCGVPPFWAESEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHPWLHNAKKAPNVPLGDIVRARLKQFSVMNRFKKKALRVIAEHLSVEEVEIMKDMFTLMDVDKDGKVTYEELKAGLQKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHIRKAFMFFDKDGSGYIELDELREALTDESGETEADVLKDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLHLHDGISGESVVV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1497 606 Pfam Protein kinase domain 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1497 606 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Alju13g1497 606 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Alju13g1497 606 SMART serkin_6 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1497 606 SMART efh_1 465 493 IPR002048 GO:0005509
Alju13g1497 606 SMART efh_1 501 529 IPR002048 GO:0005509
Alju13g1497 606 SMART efh_1 429 457 IPR002048 GO:0005509
Alju13g1497 606 SMART efh_1 537 565 IPR002048 GO:0005509
Alju13g1497 606 MobiDBLite consensus disorder prediction 74 94 - -
Alju13g1497 606 ProSitePatterns EF-hand calcium-binding domain. 546 558 IPR018247 -
Alju13g1497 606 ProSiteProfiles EF-hand calcium-binding domain profile. 497 532 IPR002048 GO:0005509
Alju13g1497 606 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Alju13g1497 606 CDD STKc_CAMK 123 381 - -
Alju13g1497 606 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Alju13g1497 606 PANTHER SERINE/THREONINE-PROTEIN KINASE 117 558 - -
Alju13g1497 606 Gene3D - 391 566 - -
Alju13g1497 606 ProSiteProfiles Protein kinase domain profile. 124 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1497 606 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Alju13g1497 606 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Alju13g1497 606 FunFam calcium-dependent protein kinase 13 210 390 - -
Alju13g1497 606 SUPERFAMILY Protein kinase-like (PK-like) 109 404 IPR011009 -
Alju13g1497 606 CDD EFh 501 563 IPR002048 GO:0005509
Alju13g1497 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Alju13g1497 606 Pfam EF-hand domain pair 430 489 IPR002048 GO:0005509
Alju13g1497 606 Pfam EF-hand domain pair 500 563 IPR002048 GO:0005509
Alju13g1497 606 ProSiteProfiles EF-hand calcium-binding domain profile. 533 568 IPR002048 GO:0005509
Alju13g1497 606 Gene3D Phosphorylase Kinase; domain 1 125 209 - -
Alju13g1497 606 Gene3D Transferase(Phosphotransferase) domain 1 210 390 - -
Alju13g1497 606 MobiDBLite consensus disorder prediction 74 98 - -
Alju13g1497 606 MobiDBLite consensus disorder prediction 1 27 - -
Alju13g1497 606 SUPERFAMILY EF-hand 410 589 IPR011992 -
Alju13g1497 606 FunFam Calcium-dependent protein kinase 7 391 566 - -
Alju13g1497 606 FunFam Calcium-dependent protein kinase 1 126 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1497 Alju-ChrAlju13 33442788 33447066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1497 60 606 EF-hand Containing Proteins AT1G74740 80.399 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju13g1497 Pkinase 1.7e-76 CL0016