Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1488 ATGAATCTTCTCGTGTTTTTATTCTTCTGTGTGACAGCTTCTATCATGCTATACGGCGGTGGCCAAGGTGGTGCTAATAGGAACGTGAACAAGGATTCGCTACAATACTCGTCTTCTCTTGCTACTAACTACAATCATCATCACCTCATTACTGTCTCACACCCAATGAGTGAGTTCATTTGGAAGACTCAAATGAAAAGTGTTACCGTTTTCTGGGTTTTCCTGGTGATTTCCGTCATCGTTTACCACCCTTCCTCTTTTGCTCTCACTCAAGATGGTCTGGCATTGTTGGAAATCAAAAGCGCTTTGAATGATACTAAGAATGTTCTTAGCGACTGGAAAGATCTTGAAGGGTCTCCATGTTCATGGACCGGTATCAATTGTTATCCTGGCGAACAGCGAGTTCGCTCAATAAATCTGCCCTACATGCAACTCGGAGGTATTATCTCTCCCAGCGTTGGCAAACTCAGTAGATTGCAGAGACTGGCACTACATCAGAACGGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACTGAGCTAAGAGCATTGTACCTGAGGGCTAATTATTTGCAAGGTGGAATACCATCAAATATTGGAAACCTTTCCTATTTAACCATATTGGATTTATCAAGCAATTCATTGAAGGGTGCTATACCTACATCTATTGGCCGCCTCACACATTTGAGACTTTTGAACTTGTCTACCAATTTCTTTTCTGGAGAAATCCCTGACATTGGAGTGCTAAGCACCTTCGGGCATGACTCGTTTACAGGAAACTTAGATCTTTGTGGGCGGCAAGTTGATAAACCTTGTCGAACGTCGCTTGGTTTCCCTGTGGTGTTACCACATGCTGCAAGTGATGAAGCTACAGTTCCTCCTCCCAAAAGATCTTCCCATTACATGAAGGTACTGCTAATAGGAGCCATGTCTGCGTTGGCCCTTGCACTTGTGATAATGGTTTCATTCCTCTGGACCTGCATACTGTCAAAGCAGGAAAGATCTGCTCGGAGATACAAAAACATTAAGAAGCATTTTGATCCAGAATCAAGCACTAAACTTATGACCTTCCATGGTGATCTACCATACCCATCATCCACCCTCGTTGAAAAGCTGGACTCTCTTGATGAAAAAGATGAAGTAGGGTCAGGAGGGTTGGGTACTGTTTACAGAATGGTCATGAATGATTCTGCAACATTTGCAGTTAAGAGGATGGACAGAAATCTTGTTGGATCTGAGCAGGTTTTTGAGAGAAACTTGGAGATTTTGGGCAGCGTCTCACACATAAATCTAGTGAATCTGCGTGGTTACTGCAAGCTTCCTTCTTCAAAGTTCCTTATCCACGATTACTTTGCCATGGGCAGCTTAGATTATCTATTGCATGAAAATGGTGGAGAACAATTCTTGAATTGGAGTGCTCGTTTGAAGATAGCCCTTGGATCTGCAAGGGGTTTGGCATATTTGCACCATGAATGGTCTCCAAAAATTGTGCACAGCAACATAAAATCCAGCAACATCCTTCTTGATGAAAACTTGGAGCCTCATGTCTCTGATTTTGGCCTTTCAAAGCTCTTGGCTGATAAGGATACCAATGTCACCACTGTAGTTGCTGGCACATTTGGCTACATGGCACCAGAGTATCTTGAAAGTGGTAGAGCTACAATGAAGTCAGATGTGTATAGTTTTGGAGTATTACTGCTAGAACTTGTGACAGGAAAGAGACCAACAGATACTTACTTTGCAAAGCAGGGACTAAACGTTGTAGGATGGATGAACATGTTGCTGAGAGAGAAGAGGATGGAGCAATTGATTGACAGAAGATGCTGTAGAGATGCAGATGCAGCAAGTGTTGAAGCAATGATTGATGCGGCAGCAAGATGCACAGATGGTAATCCAGATGAGCGTCCATCCATGAAGCAGGTGCTACAGTTGCTGGAACAAGAAATTGCCATGTCTCCTTCTTCAAGTGACTCCTATGAATCCCATTCTGATCATAGTTAA 2007 0.429 MNLLVFLFFCVTASIMLYGGGQGGANRNVNKDSLQYSSSLATNYNHHHLITVSHPMSEFIWKTQMKSVTVFWVFLVISVIVYHPSSFALTQDGLALLEIKSALNDTKNVLSDWKDLEGSPCSWTGINCYPGEQRVRSINLPYMQLGGIISPSVGKLSRLQRLALHQNGLHGTIPPEITNCTELRALYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGAIPTSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGHDSFTGNLDLCGRQVDKPCRTSLGFPVVLPHAASDEATVPPPKRSSHYMKVLLIGAMSALALALVIMVSFLWTCILSKQERSARRYKNIKKHFDPESSTKLMTFHGDLPYPSSTLVEKLDSLDEKDEVGSGGLGTVYRMVMNDSATFAVKRMDRNLVGSEQVFERNLEILGSVSHINLVNLRGYCKLPSSKFLIHDYFAMGSLDYLLHENGGEQFLNWSARLKIALGSARGLAYLHHEWSPKIVHSNIKSSNILLDENLEPHVSDFGLSKLLADKDTNVTTVVAGTFGYMAPEYLESGRATMKSDVYSFGVLLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQLIDRRCCRDADAASVEAMIDAAARCTDGNPDERPSMKQVLQLLEQEIAMSPSSSDSYESHSDHS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1488 668 Pfam Protein kinase domain 379 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1488 668 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 251 - -
Alju13g1488 668 CDD STKc_IRAK 383 649 - -
Alju13g1488 668 Gene3D Ribonuclease Inhibitor 89 276 IPR032675 -
Alju13g1488 668 SUPERFAMILY L domain-like 89 252 - -
Alju13g1488 668 Pfam Leucine rich repeat 182 239 IPR001611 GO:0005515
Alju13g1488 668 Pfam Leucine rich repeat N-terminal domain 91 128 IPR013210 -
Alju13g1488 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 111 247 - -
Alju13g1488 668 SUPERFAMILY Protein kinase-like (PK-like) 357 648 IPR011009 -
Alju13g1488 668 Gene3D Phosphorylase Kinase; domain 1 338 452 - -
Alju13g1488 668 ProSiteProfiles Protein kinase domain profile. 377 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1488 668 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 453 660 - -
Alju13g1488 668 Gene3D Transferase(Phosphotransferase) domain 1 454 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1488 Alju-ChrAlju13 33363700 33369603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1488 72 655 Receptor kinase-like Gene Family AT2G35620 45.034 8.44e-174 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Alju13g1488 Pkinase 1.6e-42 CL0016