Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1475 ATGGAGTTTTCTCTGCGCAGATCTGGTGGCCAAGAAGGTGAACCGGTCAAGGAAGAGAAGATAATTAGTGAATCTACTCCGCCTGCTTATAATCATCATGAAGCTCCTCCTCATCTTAAACAAGATTCTACTGTTGCCCAGGTGCCACCCATGAATACTACTGATAGATCCGTCGTGGACACTACTGGACCACCTCAAGCATCCTCCGACAAAAAGGAAGAGGTTGATGAACTTGAATCAGCAAGAGTTGAAATGGGGGAGGTGAGGGAAGAAAACCAAAGGCTAAAGATGTGTTTGGAGAGAATAATGAAGGAATACCAGGCCCTGCAAATGCAATTCCACGTTATAGCTCAACAAGAAGCAGCCACCACGAAATCTTGTGGTGATCAAAAACCAAATAATATTGTTAACAATCAAGAAGCAGCTCCTGAGGAATCAGATCTGGTCTCACTCAGTCTTGGAAGAGTTCCAGCTAGTAGTAACGAAAAATCTAAAGTCATGAGCTCCAAACCATCATTACAATTACAGCGACAAGAAGAAAAAGAAGAAGACTTGGCTCTTGGGCTGGATTGCAAATTTGAAACATCAAAATCTGGAAGCACAACAGAAGCATTGCCAAATAATAATGGAAGCCCCACCAATAGCTCTGAATTAGTGCACAAGGAAGAAGAAGCTGGAGAGACTTGGCCACCAAGCAAAGCACTTAATAATAAATCTCCCAGAGATTCTTCCACAGATCAAGATGAAGTTTCCCAACAAAATCCTCCTAAGAAGGCCCGAGTTTGTGTCAGGGCAAGATGTGACACCCCAACTCTGAATGATGGATGCCAATGGAGGAAATATGGACAGAAAATATCCAAGGGAAATCCTTGTCCAAGAGCTTACTATCGCTGCACAGTTGCATCAAATTGTCCCGTAAGAAAGCAGGTGCAAAGATGTGCAGAGGACATGTCGGTTCTAATCACTACCTATGAAGGAAACCACAACCACCCTCTTCCTCTCTCTGCTACTGCTATGGCTTCCACCACTTCTGCTGCTGCTTCCATGCTCTTGTCTGGCTCATCTTCAACATCCAATAATCCCACTAGTTTATTGCCGTCTTTAACGGCTACCGCCACCACCACCACTGGCTCTGATCTCCCCGGCGGCATCAACTTCTACCTCCCAGATGGCTCCAAACCTAAGCAATTCTACCTCTCAAATCCAGCACTATCACCTTCACCATCACACCCAACAATTACCCTTGACCTCACTTCCAATATTTCCTCTTCAAATTATTTCTCCTCGTCCCACTTCAATAGATTCAACTCATCAAACTACAATAACCCTCCCAGATTCCCTTCTTCAACAACCAGTCTCAGCTTCGGTTCCTCAGACTCCAATACAATGTCGTGGAGCAACAATAATGTGGGCTTCCCGGGTTACAACTATAACACTCAACCATATAATAATAATAACAGAAACATCCTCAGCAGCATCAACCTCGGAAGACAACTACCGATTCAAATTCCTCCTCCTCAAGTTCATCAAAATCCTTCACTGCCAGACACCATAGCTGCAGCAACTAAAGTGATCACAGCTGACCCAACTTTTCAGTCAGCTTTGGCTGCTGCACTTACTTCCATTATCGGCACAGGAAATAATAATAATAATAGTGCTAATAGTGTTAGTGGGAATAGCACACAAGGTGTTGGAGAAATCAACATGGGTCAGAAAATTAACCTATGGGGAGATATTTTTGCAGCTTCTTCTGCATCTGGTGGGTCTGCTTCTGATAAAGTCAGTGGATGTGGTTCCAGCTTCTTGAGTAAAACGACGACGTCGCCGGCAGCCAGAACACAAGCAGCTGGAAGTAGTGGCTTGATGTTTCTGCCTCCACCTTTGCCATTTTCTAGCTCCAAGACCGCGTCTGCGTTATCTCCGGCTGATAATAGAGACAAGTCCAATTCGTGA 1953 0.4455 MEFSLRRSGGQEGEPVKEEKIISESTPPAYNHHEAPPHLKQDSTVAQVPPMNTTDRSVVDTTGPPQASSDKKEEVDELESARVEMGEVREENQRLKMCLERIMKEYQALQMQFHVIAQQEAATTKSCGDQKPNNIVNNQEAAPEESDLVSLSLGRVPASSNEKSKVMSSKPSLQLQRQEEKEEDLALGLDCKFETSKSGSTTEALPNNNGSPTNSSELVHKEEEAGETWPPSKALNNKSPRDSSTDQDEVSQQNPPKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVASNCPVRKQVQRCAEDMSVLITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSSTSNNPTSLLPSLTATATTTTGSDLPGGINFYLPDGSKPKQFYLSNPALSPSPSHPTITLDLTSNISSSNYFSSSHFNRFNSSNYNNPPRFPSSTTSLSFGSSDSNTMSWSNNNVGFPGYNYNTQPYNNNNRNILSSINLGRQLPIQIPPPQVHQNPSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNNNNNSANSVSGNSTQGVGEINMGQKINLWGDIFAASSASGGSASDKVSGCGSSFLSKTTTSPAARTQAAGSSGLMFLPPPLPFSSSKTASALSPADNRDKSNS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1475 650 MobiDBLite consensus disorder prediction 596 622 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 196 216 - -
Alju13g1475 650 Pfam WRKY DNA -binding domain 273 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1475 650 MobiDBLite consensus disorder prediction 124 181 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 45 66 - -
Alju13g1475 650 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1475 650 MobiDBLite consensus disorder prediction 596 615 - -
Alju13g1475 650 CDD bZIP 71 105 - -
Alju13g1475 650 Coils Coil 71 112 - -
Alju13g1475 650 FunFam probable WRKY transcription factor 31 257 334 - -
Alju13g1475 650 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 554 IPR044810 GO:0003700
Alju13g1475 650 Gene3D WRKY domain 257 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1475 650 MobiDBLite consensus disorder prediction 153 174 - -
Alju13g1475 650 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1475 650 SUPERFAMILY WRKY DNA-binding domain 265 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1475 650 MobiDBLite consensus disorder prediction 1 90 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 124 145 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 196 259 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 67 90 - -
Alju13g1475 650 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1475 Alju-ChrAlju13 33289548 33293378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1475 85 545 WRKY Transcription Factor Family AT5G15130 43.633 3.00e-84 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju13g1475 WRKY 1.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2667 06 53717082 53720491 Alju13g1475 13 33289548 33293378 ECH
Alju13g1475 13 33289548 33293378 Alju13g1475 13 33289548 33293378 ECH