Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1468 ATGTCAGATCTAGCTCCCCACGAGCATTCCGTTGGAAGTCCTGAACTATGTTGCAGCTGCTTGTATTATCCTGATGTTAACGTTCTTCTAAACGTAATTGGTCCTGTTCTCACAATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTATTTGGAAAAAAGTCATCCAAATCAAATATGTCCAAAGGAAGAGAGAAACTCATTAACCAGAAAGAAGCATTGGTTGCGCCCAAGGCACCAGAAACTGGTGTGGCTGTAGAACCACCCCCATATACTGTCGCCAGAAATGAGGAAGAGTTGGAATTGGAGAATAAAGAACCAGAAAATCTTTCTCCTGTGAATCAGGAAACTGATTTGGTGTCACATGTTCATGAAGATGCACTGCCTGATCCGGAGAAAATCAGGCAGGAGGAAGCTGCAGCAAAGGCGCAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCACTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTCCAGGCAGTTGTTCGTGGAGGGAGGGTTAGACAGTCTCATGCTGGTTATGAAATCCGTGAGAAGTACAGTATGTTGAAGCTTCAGGATGGAAAACGTGCCAACCCAGTTGATATAGCCACAAAATTTGCAAAGCTATCAACAAATACTTGTACCCGCAAGCTTCTCGCATCATCTACTACAATAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCGAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCTGCTTCTCACTTTTGGATACCGATTCCCCAACCCAAGAAAATTCCAGATTCTAGGTCTCGGAAAAAGCAAGGTAATACTTCAACTGGAGAAGTTCAAATGAGCAAGTCAAGACGCACTAACCGGAAGGTTCCAATTGTAAATTCTGAATCAGTTCCAGTACAAGCAAATCCTGAATTGGAGAAACCAAAACGAAACCTGAGGAAATTATCTAACCAAGCTGCAGATCCAGTGCAAGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAGCGGAGCCTGAGAAAGGTCCAGAACCCCATTGTTGAGAATGCTGTTCCACCAGAAGTTGAGTCTGAGACCCCAAAACAGCACGTGGAAAAGGCAAATATTACCTCAGGACATATTGTTTCAGAGCAAGAGGTTGTTAGCTCTAACGAAATACCTAACAAAGAACCAACATTAGCTGAGCCTGTGCCCAGTGTACCTGATGTGGAAATTACTCCTAGACCTTCAGTTAGCAAGGAGGCGTCAGAAATGTCAGGCAGCTATCAAGTGGAACTGGATCCAAAGCCCTTGGTAGAAAATACAAGTAAAGATAGAAATGCTTCTGATGACAGAGCTTTAAATGAGCCAAGAGATCTACCAGAGAGTGGATGTAAAGATGAAAATTCTCCACTAACAAATGGGGATCTGAATCATAAGGAAGATCCAACAGGCAATGAAAACCAGAGACCCTCCCGGCGAACCTCAGTTCAAGGAAAACAGGAACGTACAGAGAATGGTGTACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCACAAGGATCACCAAGGTTGGGACAAGATAGTGGTGAGAGAAACAACTCTGCACGGCGACATTCTTTGCCATCCTCTACTAACAGCAAAATTAGTTCGCATTCACCAAGGACACAGAGACCAGTTCAACCAGGCAGCAAAGGGGGGCACAAAGCTGTCTCATCAAGAGATGGAAACGGAAGAGTAATTCAAGCCGAGTGGAAGAGGTGA 1863 0.4439 MSDLAPHEHSVGSPELCCSCLYYPDVNVLLNVIGPVLTMGKSPGKWIKTVLFGKKSSKSNMSKGREKLINQKEALVAPKAPETGVAVEPPPYTVARNEEELELENKEPENLSPVNQETDLVSHVHEDALPDPEKIRQEEAAAKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQAVVRGGRVRQSHAGYEIREKYSMLKLQDGKRANPVDIATKFAKLSTNTCTRKLLASSTTIMALRLQYVPGDPNSVLSWLERWSASHFWIPIPQPKKIPDSRSRKKQGNTSTGEVQMSKSRRTNRKVPIVNSESVPVQANPELEKPKRNLRKLSNQAADPVQENPQSELEKVKRSLRKVQNPIVENAVPPEVESETPKQHVEKANITSGHIVSEQEVVSSNEIPNKEPTLAEPVPSVPDVEITPRPSVSKEASEMSGSYQVELDPKPLVENTSKDRNASDDRALNEPRDLPESGCKDENSPLTNGDLNHKEDPTGNENQRPSRRTSVQGKQERTENGVQSSPTLPSYMAATESAKAKLRAQGSPRLGQDSGERNNSARRHSLPSSTNSKISSHSPRTQRPVQPGSKGGHKAVSSRDGNGRVIQAEWKR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1468 620 PANTHER IQ-DOMAIN 5-RELATED 39 583 - -
Alju13g1468 620 Pfam Protein of unknown function (DUF4005) 522 599 IPR025064 -
Alju13g1468 620 Gene3D - 135 183 - -
Alju13g1468 620 MobiDBLite consensus disorder prediction 393 418 - -
Alju13g1468 620 MobiDBLite consensus disorder prediction 460 487 - -
Alju13g1468 620 SMART iq_5 136 158 IPR000048 GO:0005515
Alju13g1468 620 SMART iq_5 159 180 IPR000048 GO:0005515
Alju13g1468 620 Pfam IQ calmodulin-binding motif 139 158 IPR000048 GO:0005515
Alju13g1468 620 Pfam IQ calmodulin-binding motif 161 178 IPR000048 GO:0005515
Alju13g1468 620 ProSiteProfiles IQ motif profile. 161 188 IPR000048 GO:0005515
Alju13g1468 620 MobiDBLite consensus disorder prediction 559 593 - -
Alju13g1468 620 MobiDBLite consensus disorder prediction 511 540 - -
Alju13g1468 620 ProSiteProfiles IQ motif profile. 137 165 IPR000048 GO:0005515
Alju13g1468 620 MobiDBLite consensus disorder prediction 297 330 - -
Alju13g1468 620 MobiDBLite consensus disorder prediction 382 620 - -
Alju13g1468 620 MobiDBLite consensus disorder prediction 286 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1468 Alju-ChrAlju13 33251267 33256364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1468 39 620 IQD Protein Family AT1G74690 44.861 7.09e-127 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2673 06 53753710 53758170 Alju13g1468 13 33251267 33256364 ECH
Alju13g1468 13 33251267 33256364 Alju13g1468 13 33251267 33256364 ECH