Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1465 ATGGGAAATTGCTTGGGTTCTCGTACCGGGTTTGATTACAGTCGAACCTCTCATCAAACTCATGATGATTCTGAAGTTGCTGGTAGAAGCACCCTTTCCTGTTTAAGTCAATTAGTTTTTGAACACAAGAACAAAGATAAATCTCAGACTCTCTGGGCTCCAAGATCTGAAGGTGATATACTTTCCTCGCCAAATTTGAAGGCCTTCACATTTAATGAACTTAAGAATGCTACTAGGAACTTTGGTCCTGATAGTCTAATAGGACAAGGAGGCTTTGGTGATGTCCACAAGGGGTGGATTGATGAGCAATCCCTTACTGCTACTAAGCCCGGATCTGGAATGGTTGTGGCCGTGAAGAAGTTGAAACCTGAAGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAAGTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTATTGGATACTGCCTACATGGAGATAATCGACTTCTAGTATATGAGTACATGCCCAAAGGCAGCTTGGAGAACCATCTATTTCGCAGGGGCTCACAGTCACTTTCATGGGCAACAAGGATCAAAGTTGCCATTGATGCTGCTCGTGGTCTTGCCTTCCTACATGACTCCAATCCACAAGTTATCTACCGTGATTTTAAGGCTTCCAACGTATTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGTTTGGCTAAAGCAGGACCAACTGGTGATCGTTCTCATGTTTCAACTCAAGTCATGGGTACTCACGGCTATGCTGCTCCTGAGTATATTGCTACAGGTCGGCTGACAACAAAGTGTGATGTCTATAGCTTCGGGGTTGTGCTTTTGGAGCTGCTATCAGGGCGTTGTGTCATCGACAAAACAAAATATAGAGTGGAACAAAATCTGGTAGAATGGGCAAAAGCGTCCTTTTTGGGCGATAGGAGAAAGCTATTCAGGATTATGGACACCAAGTTAGAAGGCCAGTACCCACAGAGGGCTGCTTATGCAGCTGCAATCCTTGCATTACAGTGCATTAGTGAGGCCAAAATCAGACCCCAGATGTCTGAGGTCGTGGCTACGTTAGAACAGCTTCTGGTCAGCAGATCATCCGGCCAGAGCCGGATGTCTGTCCCTTCTACAGGGAACTCACCTTTGGGAAATGTTCATTGTTTAACAGAGAGCAAGTCTGTATCTAGTCTGTGA 1203 0.4456 MGNCLGSRTGFDYSRTSHQTHDDSEVAGRSTLSCLSQLVFEHKNKDKSQTLWAPRSEGDILSSPNLKAFTFNELKNATRNFGPDSLIGQGGFGDVHKGWIDEQSLTATKPGSGMVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLHGDNRLLVYEYMPKGSLENHLFRRGSQSLSWATRIKVAIDAARGLAFLHDSNPQVIYRDFKASNVLLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVMGTHGYAAPEYIATGRLTTKCDVYSFGVVLLELLSGRCVIDKTKYRVEQNLVEWAKASFLGDRRKLFRIMDTKLEGQYPQRAAYAAAILALQCISEAKIRPQMSEVVATLEQLLVSRSSGQSRMSVPSTGNSPLGNVHCLTESKSVSSL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1465 400 Pfam Protein tyrosine and serine/threonine kinase 86 290 IPR001245 GO:0004672|GO:0006468
Alju13g1465 400 Gene3D Transferase(Phosphotransferase) domain 1 167 378 - -
Alju13g1465 400 PANTHER OS01G0588500 PROTEIN-RELATED 44 364 - -
Alju13g1465 400 SUPERFAMILY Protein kinase-like (PK-like) 56 361 IPR011009 -
Alju13g1465 400 FunFam Serine/threonine-protein kinase PBS1 167 378 - -
Alju13g1465 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Alju13g1465 400 Gene3D Phosphorylase Kinase; domain 1 53 166 - -
Alju13g1465 400 FunFam Serine/threonine-protein kinase BIK1 48 166 - -
Alju13g1465 400 ProSiteProfiles Protein kinase domain profile. 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1465 400 MobiDBLite consensus disorder prediction 372 400 - -
Alju13g1465 400 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1465 Alju-ChrAlju13 33228873 33232126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1465 67 384 Glycoside Hydrolase AT3G07070 52.795 9.94e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju13g1465 PK_Tyr_Ser-Thr 9.1e-47 CL0016