Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1461 ATGTCTGGCCAAAATAGTTGCAGAGCTTCAAACTTGAACGAGAATGAGATCAATGATCTTGTGTCGAGGTTACAAGCACTTCTGCCTCGCCTGAACCGAAGGACTGACTCAAGGGTATCAGTGACGAAGATATTGAAAGAAACTTGCAGTCACATCACGAAGCTACAGAAAGAGGTGGAAGAGCTGAGTGAAAGGGTAATAGAGCTGATGGAATCTGCTGACATTATGGAAATAGACGAGGAGAGTCTTAGAAGATTGTTGCTACATTGA 270 0.4333 MSGQNSCRASNLNENEINDLVSRLQALLPRLNRRTDSRVSVTKILKETCSHITKLQKEVEELSERVIELMESADIMEIDEESLRRLLLH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1461 89 Gene3D - 14 87 IPR036638 GO:0046983
Alju13g1461 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 73 IPR036638 GO:0046983
Alju13g1461 89 Coils Coil 45 79 - -
Alju13g1461 89 PANTHER DNA BINDING PROTEIN 5 87 IPR044172 -
Alju13g1461 89 Pfam Helix-loop-helix DNA-binding domain 15 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1461 Alju-ChrAlju13 33175261 33175864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1461 9 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 50.746 8.91e-16 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju13g1461 HLH 0.00011 No_clan