Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1460 ATGAATTCCTCCAAATTCGTCCATGGCTATGGCAAAGTAGCTGATCACCTCGAAGATCAGCCCTCTTTCCCCAGATCCTCCAATCGCAAGCCCCTTGTTGCCTTCATTTCTGTTTTAGCCATCCTCTTCCTTACTCTCTCTGTCGGTGTCACCCTCGGAGCTCTCATCCACAACTCCAATTCCAGATCACGATCAACTCCTTCCACCGCCAATACCGGCGTCGTCGCCTCCATCAGAACCGTCTGCAACGTCACGCGCTTCCCGGCCTCCTGCTACTCCAGTATTTCCCCCCTCACCACTTCCCTCCAAAACCCTAACGACCCCGAATCCATTCTCAAGCTTTCTCTTCGTGTTTCCCACGACGAACTCTCTAAGTTGTCTTCCTCCCTCAGAACCTTGGCTTCGACCTCCGACTCGCCCGCTCTCCCTGATTGTAAGGATCAGATCGATGACGCGCTGAGTCGACTCAACGACTCACTGTCGGCGATGGACGTGGCTCCCGGCGACAAGGCGTTGACGGATGCAAAGATCAACGACATACAGACGTGGATCAGCGCGGCGGTAACGGACCAGGAAACGTGTTTGGATGGATTGGAGGAGACAGAGTCGGCGGCGCTGGGGGAGATGAAGGGGAAGATGCAGAGGTCGAGGGAGTACACAAGCAACAGCTTAGCCATAGTTGCCAACATTCGCATCTTACTGCAACGCTTCAATGTGCCCCTCCATTGA 729 0.5446 MNSSKFVHGYGKVADHLEDQPSFPRSSNRKPLVAFISVLAILFLTLSVGVTLGALIHNSNSRSRSTPSTANTGVVASIRTVCNVTRFPASCYSSISPLTTSLQNPNDPESILKLSLRVSHDELSKLSSSLRTLASTSDSPALPDCKDQIDDALSRLNDSLSAMDVAPGDKALTDAKINDIQTWISAAVTDQETCLDGLEETESAALGEMKGKMQRSREYTSNSLAIVANIRILLQRFNVPLH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1460 242 PANTHER PECTINESTERASE 46 228 - -
Alju13g1460 242 NCBIfam pectinesterase inhibitor domain 68 229 IPR006501 GO:0004857
Alju13g1460 242 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Alju13g1460 242 Pfam Plant invertase/pectin methylesterase inhibitor 77 226 IPR006501 GO:0004857
Alju13g1460 242 FunFam Pectinesterase 74 231 - -
Alju13g1460 242 CDD PMEI-like_3 80 230 - -
Alju13g1460 242 SMART PMEI_2 73 226 IPR006501 GO:0004857
Alju13g1460 242 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 229 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1460 Alju-ChrAlju13 33166897 33167625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1460 66 242 Carbohydrate Esterase AT1G53840 44.444 2.47e-38 138