Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1459 ATGGCGATGAGCATTGGTATCATGGACAGTGCTTACTTTGTCGGCCGGAATGAGATTTTGACTTGGATCAACAAAAGACTTCAACTCAATCTCTCGCGCATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGATGCGAAGTCAGAGTATGATATGATCCAGAATTACAAAATTCTTCAGGAAGTATTCAACAAGCTGAAGATTGAGAAGCATATTGAAGTTAACAGGCTTGTTAAAGGCCGGCCTTTGGATAACCTGGAATTTCTACAATGGCTGAAGCGATATTGCGACTCTGTTAATGGCGGCATTATGAATGAGAATTATAATCCTGTGGAGCGCAGGAGCAAGTGTGGAAGGGATAAAAATGTGAAGAGTTCTTCGAAGAGCTCAAAGTCCCTACAAACGAATGTTGTTAATAATTCTATTTCAGGCAACACACTCAGTCCTAATAGAACCTCTGGGCCCAAGCAACAAAGGTCGAGTTGTGCAGCAGGCATGACTAATACTTCAGTAGATGTCCAAGCTTTGTCCAAGGAGTTAACTGATCTCAAACTCTCCCTGGATATCCTGGAAAAAGAAAGAGACTTTTACTATGCAAAACTAAGGGACATAGAAATTCTCTGTCAGACTCCACAACTGGAGAATGGACCTATGTCTATGGCAATCAAGAAGATTTTGTATGCTGCTGATGCAAAGGAGTCAGCGTTAGATGAAGCTCAGGATTACCTTAATCAAATTTTGGAATCTGCTCAATCTGAAGAAGAAGAAGAAGAAGAAAAAGCAGAAGCAGAAACTGAAGCTTGA 858 0.4161 MAMSIGIMDSAYFVGRNEILTWINKRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKSEYDMIQNYKILQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKCGRDKNVKSSSKSSKSLQTNVVNNSISGNTLSPNRTSGPKQQRSSCAAGMTNTSVDVQALSKELTDLKLSLDILEKERDFYYAKLRDIEILCQTPQLENGPMSMAIKKILYAADAKESALDEAQDYLNQILESAQSEEEEEEEKAEAETEA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1459 285 Gene3D - 6 134 IPR036872 -
Alju13g1459 285 MobiDBLite consensus disorder prediction 145 183 - -
Alju13g1459 285 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Alju13g1459 285 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 6 274 IPR027328 GO:0008017
Alju13g1459 285 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 183 253 IPR004953 GO:0008017
Alju13g1459 285 MobiDBLite consensus disorder prediction 266 285 - -
Alju13g1459 285 SUPERFAMILY EB1 dimerisation domain-like 191 249 IPR036133 GO:0008017
Alju13g1459 285 MobiDBLite consensus disorder prediction 131 183 - -
Alju13g1459 285 Coils Coil 191 211 - -
Alju13g1459 285 Coils Coil 254 285 - -
Alju13g1459 285 Pfam EB1-like C-terminal motif 208 246 IPR004953 GO:0008017
Alju13g1459 285 Gene3D - 183 255 - -
Alju13g1459 285 FunFam RP/EB family microtubule-associated protein 6 134 - -
Alju13g1459 285 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Alju13g1459 285 FunFam Microtubule-associated protein RP/EB family member 1B 189 264 - -
Alju13g1459 285 MobiDBLite consensus disorder prediction 268 285 - -
Alju13g1459 285 SUPERFAMILY Calponin-homology domain, CH-domain 3 132 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1459 Alju-ChrAlju13 33158653 33161888 Wgd