Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1456 ATGGAGGGTGGTGATGATCTCCACCACCACCACCACCGTCCCAACTTCCCATTTCAGCTTCTCGAGAAGAAAGAAGATCACCGCCAAGAGCCTGCTGCTTCTTGTTCAACTTCTTCCTCTTATCCTTCTCTAGCCATCTCCGCCGAACCCCCCGCCGCCTCCAATTCCAACCGATCCAACCAGGTCCTTAACGTCGTCCCTCCAACGTCTTCCTCCTCCGAACCCTCCAATAAGAAGCCCCCGCCTAAGAGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGTCGCGGCCGACGTATCCGAATGCCAGCTCTGTGTGCAGCTCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCATAAGTCCGACGGCGAAACCATCGAGTGGCTCCTCCAACAGGCTGAGCCCGCCGTCATCGCCGCCACCGGCACCGGGACGATCCCCGCTAATTTCACTTCCCTTAATATCTCTCTCAGAAGCTCCGGCTCCACCATGTCCGTCCCTTCTCAGCTCAGATCGTCTTACTTCAATCCAAACTTCTCCATCCAGCAGCGGAGAAGCTTCTTCCCCGGAATCGGCTTGTCTTCCGATGGCGGCAACAGCAACACTTCAACGCTGCTGAATTTTCACTCTAATAGTTTCTCCGGCGGCGGAGGCAGCATGCTGCAAGCAAAGCAGGAATTGCGCGGAGGCGGCGAGGCCGGAGGCGTTCCGTCCTCCACAACAACGACGTTGGATTTGACGGAGGCGGAAGAAGGTATGGCTGCGAGGAAAAGGCGGCCGACGGAGCAAGAGTTGTCGCCGTCTACTTCAGCGCAGCAATATCAAATGGGAAATTATTTATTGCAATCGAGCGCGGGGGCGAGTACGACGAGCCACGCACAGATTCCGGCGAATATTTGGATGGTGACGAATTCTAATAATCAAGTTATGAGCGGTGATCCTATATGGACATTCCCGTCGGTGAATAATAGCGCTTTGTACAGAGGCGCTACCATGTCTAGTGGGTTACATTTTATGAACTTCCCTACTCCTATGGCTTTGTTGCCTGGTCAACAATTAGGGTCGTCTGGGATTGGCGGCGGCGGAGGAGCTGGGAATATAAACGAGGGACATTTGAGTATGCTTGCCGGCGTCAGCCCGTACCGGCCGGTGAGTGGTATTTCGGAGTCTCAGGCAAGTGGGTCTCAATCACACCACGGTGGTGGTGGTGGGGGCGGTGATGATCGACATGATACACACAGTCACCGCTCCTAG 1257 0.5577 MEGGDDLHHHHHRPNFPFQLLEKKEDHRQEPAASCSTSSSYPSLAISAEPPAASNSNRSNQVLNVVPPTSSSSEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSIQQRRSFFPGIGLSSDGGNSNTSTLLNFHSNSFSGGGGSMLQAKQELRGGGEAGGVPSSTTTTLDLTEAEEGMAARKRRPTEQELSPSTSAQQYQMGNYLLQSSAGASTTSHAQIPANIWMVTNSNNQVMSGDPIWTFPSVNNSALYRGATMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGGAGNINEGHLSMLAGVSPYRPVSGISESQASGSQSHHGGGGGGGDDRHDTHSHRS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1456 418 MobiDBLite consensus disorder prediction 1 31 - -
Alju13g1456 418 MobiDBLite consensus disorder prediction 385 399 - -
Alju13g1456 418 MobiDBLite consensus disorder prediction 383 418 - -
Alju13g1456 418 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 400 IPR005333 GO:0003700
Alju13g1456 418 MobiDBLite consensus disorder prediction 81 99 - -
Alju13g1456 418 MobiDBLite consensus disorder prediction 32 80 - -
Alju13g1456 418 MobiDBLite consensus disorder prediction 404 418 - -
Alju13g1456 418 Pfam TCP family transcription factor 85 201 IPR017887 -
Alju13g1456 418 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Alju13g1456 418 MobiDBLite consensus disorder prediction 1 99 - -
Alju13g1456 418 MobiDBLite consensus disorder prediction 228 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1456 Alju-ChrAlju13 33139554 33140810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1456 78 412 TCP Transcription Factor Family AT3G47620 43.735 1.42e-63 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju13g1456 TCP 7e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1456 13 33139554 33140810 Alju13g1456 13 33139554 33140810 ECH