Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1446 ATGGTGAATCAGAGTCAGCCACTCGTGGGGCGGAACCCAAAGAATGATTTTGATGAAGTTCCATTCCCTCTCACGTACCAATTACATTCACCTTACTTATTAAGCGGAAATTTAGGACTGGATTGGGTTGATGATGAGTTAGCCGTACCTTGGATGGAACCAGATCCTCTGTTTGAAACTCTGGCCATTGAACCAACACCGAGCGAGCAAGACTATGACTTTTACGACATTAAGAAGGGACCGGGGGTGTGGAATGAGATTGACCATGGGTTTGATCCAGATAAGGCTGTTTATGTTGAGTGCAATAAGAATGGAGAAAGTGGGGAGGAAGAGAGAGATGAAGTGAAACGATCAGGCAGAGAAGAGACAAGTGGAAGCAGTACTAAGTTGTTGACGAGGAAGACTATTTCTCGGTACTTTTATATGCCAATCACACAGGCTGCCAAAGAGCTTAATGTGGGCCTCACGCTTTTGAAGAAAAGGTGCAGAGAATTGGGAATTAGAAGGTGGCCACATAGGAAACTGATGAGCCTTCAAACCTTGATAAACAACGTAAAGGAGCTAGGGAAAGAGGGGGGACAGGAGAGTGAAGATAAACTGAGGAATGCGCTGAAGATATTGGCGGAGGAAAAGAAGATGATGGAGGAGATGCCTGATTTGCAGCTTGAGGATAACACAAAACGGCTCAGACAAGCTTGCTTCAAAGCCAACTACAAGAAAAGGAAGCTCATGGGGTCTTCCATGGAGTCTGATCAGTCTGCAAGGAATGAATACAATTATGAAGATCATGTACAAGAACAGGACATCAAGCATATGTTGCCATCCGTCCCTCTCCATTTCACAACATAA 849 0.4464 MVNQSQPLVGRNPKNDFDEVPFPLTYQLHSPYLLSGNLGLDWVDDELAVPWMEPDPLFETLAIEPTPSEQDYDFYDIKKGPGVWNEIDHGFDPDKAVYVECNKNGESGEEERDEVKRSGREETSGSSTKLLTRKTISRYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVKELGKEGGQESEDKLRNALKILAEEKKMMEEMPDLQLEDNTKRLRQACFKANYKKRKLMGSSMESDQSARNEYNYEDHVQEQDIKHMLPSVPLHFTT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1446 282 PANTHER PROTEIN RKD4 107 254 IPR044607 GO:0003700
Alju13g1446 282 ProSiteProfiles RWP-RK domain profile. 111 198 IPR003035 -
Alju13g1446 282 Coils Coil 197 217 - -
Alju13g1446 282 MobiDBLite consensus disorder prediction 103 128 - -
Alju13g1446 282 MobiDBLite consensus disorder prediction 104 123 - -
Alju13g1446 282 Pfam RWP-RK domain 131 178 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1446 Alju-ChrAlju13 33037118 33038342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1446 117 247 AtRKD Transcription Factor Family AT1G18790 69.173 3.29e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Alju13g1446 RWP-RK 4.1e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1446 13 33037118 33038342 Alju13g1446 13 33037118 33038342 ECH