Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1436 ATGGAAAACGTTGTGGGACTCTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGATTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCATTACCTGTACAAGAAGGTCACTGATTCCAACTTCTCAGCCAGGGCCATTGGGGAGGTGGATTTGAACAGGTCTGAGCCATGGGACTTGCCATGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTTTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGAGATTTACAGAGGAAAATCTCTGGTTGGTATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCACCCAAAGGAGGAAAAACCAACTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCTGTCCACAACCTCCCCAAAACAGCAAAGAACGAGTGGGTGATATGCAGGGTTTTTCAAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGTTAGATTCTCTGGGAAATGAATTGGGTTCTTCTGGTTTGCCTCCATTGACAGATTCGTCACCTTTCCCTGGCAATAAAACCAGACCTATCACAGATCAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGCTCATCAGAGAAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACAACTTCCCTAATTATGGTGTTCCTTCTTCGAATCCCTCCTCAGACACTACACTTCCCAGAATCCCACTTCCTGGTTCCTTATATTCCTCTCAACAACAACAACCACATCATCATCAAGCTCCTTCAAGTTTAGCTTTGCCCAGTTCTATGTATGGCCTGCAAGACCAGACTTTGCTCAGAGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGGGACATGATCAGTGTGTCTCAAGAAACAGGTCTCACTACAGACATGAACCCTGAAATCTCCTCGGTTGTGTCGAATCTCCATCAGCAACAGCAGCAGCAGCAACCAACTGCTTCATCTGCAGCAATGGACTATGAAGGTTTGTGGACTTACTGA 1107 0.4472 MENVVGLCKEEEKMNLPPGFRFHPTDEELISHYLYKKVTDSNFSARAIGEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKTLVFYKGRAPKGGKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTRPITDQSAYVPCFSNPIDAHQRNNQGGIFDSYSNNFPNYGVPSSNPSSDTTLPRIPLPGSLYSSQQQQPHHHQAPSSLALPSSMYGLQDQTLLRALLENQESNRNNFKPERDMISVSQETGLTTDMNPEISSVVSNLHQQQQQQQPTASSAAMDYEGLWTY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1436 368 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Alju13g1436 368 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 322 - -
Alju13g1436 368 FunFam NAC domain-containing protein 100-like 25 170 - -
Alju13g1436 368 MobiDBLite consensus disorder prediction 246 286 - -
Alju13g1436 368 MobiDBLite consensus disorder prediction 189 208 - -
Alju13g1436 368 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Alju13g1436 368 MobiDBLite consensus disorder prediction 190 208 - -
Alju13g1436 368 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Alju13g1436 368 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1436 Alju-ChrAlju13 32976097 32977413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1436 14 368 NAC Transcription Factor Family AT5G07680 56.825 1.93e-128 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju13g1436 NAM 1.4e-39 No_clan