Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1428 ATGGAGACTGAGGAAATTAATCTGAACAAAGAATCTGTTCTTGGTGCGGGAAACAATAGTAAGAGTGGTGATGGATTCATTGATAGAAGCAAAGTCAGGATTTTGCTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTGTTTACCCTTCTCTTGAAGTGCTCTTATCAGGTTACTTCAGTGAGGTCAGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTCGACCTCCCCATGAAGAAGGGTTTTAAGATGTTGAAGTATATTGCACGGGACAGGGAACTGCGCCGAATCCCTGTTATAATGATTTCGGCTCAAGACGAGGTATCCATTGTTGTTAAGTGCTTAAAACTCGGGGCAGCTGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATCTTGAACTATGACTTCGACCTGGTTGTATCAGATCCTAGCGACGCTAATACAAACAGTACCACGTTGTTCTCAGATGATACAGATGACAGGTCCAAGAGAAGCACTAATCCTGAGACAGGAATGCCTATCCAACAGGAACATGAGTCGACTGTTGCTGTTGCCTCTGCTGTTGTAGTTTTTGAGGAGCTTCCAAATGCTCAAGCATCAGAATATCGCCCTGAAGTGCCTGGAATTAGTGACCGCCGAACTGTTGTAGGACATTTTTCGGCTGGTCCCAAGAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACATATGTCAAAGCAGCCACAATGAAGAGCAACTTCCAACCAGTCATTCATGTTGATCATAATGCTGCTACACGTTTAAGGATGGAAGAAGATACACATCAAGCATGCACTCAACAAGGGGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCGGATTCTTTCTCCATCGAAAGGTCTTCTACTCCTCCTGCATCAATGGAAACTTCACAGCAAAAGCACATCATGGAAGAACCTTTACCTCAGGGTATGACCCCTCCAAGAAATGGAACTCATAATTCTGAACTTGAAGTATCCGGCATGCCCGGCCAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATGATGATGCCTTCATCAGCGCAATTGTACCAGAAGAGTCTCCAGGACCTGCAGGCCCATGCTGGTACAGCTATCATTACACAGTACAATCATCTTTCGCAATGCCCTCCTCATACAACGGGTATGACATCTTTCCCATATTACCCAATGGGTTTATGCTTACAACCTGGACAGATGTCTACTGTTCATTCATGGCCATCATTTGGTGGTAGTTCAAGTTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCAGCGTTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTTGCTGAAAGACGGCCCCGGGTAAGAGGACAGTTTGTTAGAAAGTTGAATGGCGTAAATGTTGATCTTAATGGCCAACCTGCTTCCACCGACTACGATGAGGACGATGAAGAAGATGAAGAGGACAATGAACCACTAGGTTCCTCTCCCGAGGATGCTTGA 1707 0.437 METEEINLNKESVLGAGNNSKSGDGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGFKMLKYIARDRELRRIPVIMISAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDRSKRSTNPETGMPIQQEHESTVAVASAVVVFEELPNAQASEYRPEVPGISDRRTVVGHFSAGPKKSELKIGESSAFFTYVKAATMKSNFQPVIHVDHNAATRLRMEEDTHQACTQQGVNDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASMETSQQKHIMEEPLPQGMTPPRNGTHNSELEVSGMPGQHHYPYYISGVVNPMMMPSSAQLYQKSLQDLQAHAGTAIITQYNHLSQCPPHTTGMTSFPYYPMGLCLQPGQMSTVHSWPSFGGSSSSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDNEPLGSSPEDA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1428 568 MobiDBLite consensus disorder prediction 532 568 - -
Alju13g1428 568 SUPERFAMILY CheY-like 28 157 IPR011006 -
Alju13g1428 568 Pfam CCT motif 488 530 IPR010402 GO:0005515
Alju13g1428 568 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 241 IPR045279 GO:0009736
Alju13g1428 568 MobiDBLite consensus disorder prediction 321 385 - -
Alju13g1428 568 ProSiteProfiles CCT domain profile. 488 530 IPR010402 GO:0005515
Alju13g1428 568 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Alju13g1428 568 MobiDBLite consensus disorder prediction 544 568 - -
Alju13g1428 568 SMART REC_2 32 147 IPR001789 GO:0000160
Alju13g1428 568 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Alju13g1428 568 MobiDBLite consensus disorder prediction 182 212 - -
Alju13g1428 568 Gene3D - 32 233 - -
Alju13g1428 568 MobiDBLite consensus disorder prediction 326 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1428 Alju-ChrAlju13 32896357 32900677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1428 21 549 Response Regulator Gene Family AT5G61380 50.980 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Alju13g1428 Response_reg 1.2e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1428 13 32896357 32900677 Alju13g1428 13 32896357 32900677 ECH