Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1422 ATGGGTTGTGTCAACTCGAGGCAGACGGTGTCGGTGACGCCGGCGGTGGATCACTCCGATCTGTTTCAGGGCAATGTGAGTTTGGGACATTCGGGAAGAAGCTTGGGCGAGTTGGATGGTAAGAAAAAGAAGAAGAAGAGTGAGTCAGTGGGCGAGTCAGAGAGAGAGAGTTCAAATCGGGGATGTGATGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAATATGTAGAAGGAGAGCAAGTCGCCGCCGGCTGGCCGGCATGGCTCACCGCCGTCGCCAGCGAAGCCATCCACGGCTGGGTGCCCCTCCGAGCCGACGCGTTTGAGAAGCTCGAGAAGATTGGGCAGGGGACATATAGTAGTGTGTTCAGAGCGAAGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGAGGTTTGATATTTTTGAACCAGAAAGTGTGAGATTTATGGCACGAGAAGTAATGATTCTGAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGTTTGATTACTTCCAAGTTGTCTTCTAGCATATACCTTGTGTTTGAGTACATGGAACATGACATTACAGGGCTCTTGTCCAGCCCTGACATCAAATTTAGCGAATCACAGATTAAATGTTACATGAAGCAGCTGTTGTCTGGGCTTGATCATTGTCATTCACGCGGTGTAATGCATAGAGATATAAAAGGATCGAATCTTCTGGTGAACAATGAAGGGGTACTGAAAGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTCACCAGCCGTGTTGTCACTTTGTGGTACCGCCCTCCTGAACTTTTGTTGGGTTCCACAGATTATGGCCCCTCTGTGGATCTATGGAGTGTTGGCTGTGTATTTGCAGAACTTCTTTTTAGAAAGCCAATTCTTCAGGGCAGAACTGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAAGCCACAGCAAACATACAATAGTTGCCTCCAAGAGACCTTCAAAGATTTCCCCATAACTACTGTGAATCTCCTTCAAACTCTCCTTTCCATTGAATCATACAAGCGTGGAACTGCTTCATCTGCTCTTTCATCAGAGTATTTCAAGACAAAGCCTTATGCATGTGACCCATCAAGCTTGCCTGTATACTCACCTAGCAAGGAGATTGATGTAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACCAGGAATCAGTAAACTAGCCCCAGCAGAGCGTTTGGTTAATCAGACTCGAAATTCCCAAGTGGTCAATTCTAGAACTTCCTTCATCCTAAAAGAGAACACCAATATAGGCGAGGAGGTTGCGAAGCCATCAACTGATAGTGATAGAGCAGAACAAGATGCTTCTTCCCATGTTAAGAATCCATCTCATGGAGATATTCCCATACTACAAGTTTCAACTTCAAGTGGCTTTGCGTGGGCAAAAAGGCGTAAAGATGATGTTTCGAGAAGAAGATCTCATTGTAGATCCATTTCGAGGGGACATATTTTGAATTCTTCAGAACATTCTTCCCTACATTCAAGAAACAACTTTGATTCAAGAAACCAGGAAAACAAGGAATTCTGTGGAGGAAGATCCAACTCAAGGGGTCATAATGACATACGCGAAATCTCTAAGCTTGCAATGTTGAACCAATGGGGCAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGATGAATACCACTCACAAGAGCTATCTATAGCCCTTTATCACAGAGAATATTCAGCATCCAGGAGAAGCAAAATGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCCTTGCTATCTCAAATGCATGCGGTTGATGAGCTGTTGGAGAGACACGAGCGTCACATTCGCCAAACAGTGAGAAGATCTTGGTTTCAGAAAGGTAAGAAGCATGAGAAGAAATTGGAAGACTAA 2052 0.4444 MGCVNSRQTVSVTPAVDHSDLFQGNVSLGHSGRSLGELDGKKKKKKSESVGESERESSNRGCDESLSFRLGNLQKYVEGEQVAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREVMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQQTYNSCLQETFKDFPITTVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACDPSSLPVYSPSKEIDVKHWEESRRKKIGGRARGPETRKPSRKPPGISKLAPAERLVNQTRNSQVVNSRTSFILKENTNIGEEVAKPSTDSDRAEQDASSHVKNPSHGDIPILQVSTSSGFAWAKRRKDDVSRRRSHCRSISRGHILNSSEHSSLHSRNNFDSRNQENKEFCGGRSNSRGHNDIREISKLAMLNQWGKFDRPDSFDASDEYHSQELSIALYHREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERHIRQTVRRSWFQKGKKHEKKLED 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1422 683 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1422 683 MobiDBLite consensus disorder prediction 477 512 - -
Alju13g1422 683 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Alju13g1422 683 FunFam probable serine/threonine-protein kinase At1g54610 192 432 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 418 449 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 485 501 - -
Alju13g1422 683 Gene3D Transferase(Phosphotransferase) domain 1 192 431 - -
Alju13g1422 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Alju13g1422 683 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 418 442 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 32 63 - -
Alju13g1422 683 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Alju13g1422 683 CDD STKc_CDK9_like 109 393 - -
Alju13g1422 683 SUPERFAMILY Protein kinase-like (PK-like) 102 400 IPR011009 -
Alju13g1422 683 MobiDBLite consensus disorder prediction 526 579 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 561 579 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 35 62 - -
Alju13g1422 683 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1422 683 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1422 683 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Alju13g1422 683 MobiDBLite consensus disorder prediction 541 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1422 Alju-ChrAlju13 32851210 32855134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1422 101 425 Core Cell Cycle Gene Families AT5G10270 50.147 4.22e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju13g1422 Pkinase 5.8e-68 CL0016