Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1419 ATGTCAGAGCATGTAACAGATTCCTGGGGCTTAGTATTAATCTGTTCCTTGATCCTTTTCTTAGCGGGGAAAATAGTTGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTTTTGCTTCAGCTTAAATTATACCTCAACAATCAAACTCTTGTAGACCAAGGACAATACACAAACTGGAACACGACCAGTTCGAATCCTTGTGACTGGTCGGGAATCTGGTGTAGCGGCAATGAAACAACGAGGAGGGTGGTCGGAGTTGACCTCTCCGACAACAAAATCACCGGAAAGATATTCCAGAACTTCTCTCACCTCACTCAGCTCATACACCTTGACCTTTCCCATAACACACTCTCCGGCGAGATTCCGGCGGACTTGAGGCGGTGCCAAAAGCTCAAGTATCTCAACCTCTCCTACAATATTCTTCCTGAAGAGTTGAATTTAATTGGCTTGACAAACTTACAAACTCTTGACTTATCAGGCAACAGGCTTTATGGAGATCTTGGGTTTAATTTCCCTGCCATTTGTGACAATCTGATTAGTTTGAATATCTCAGGGAATAATTTCACTGGGAGGATTGATGAGTGCTTCGATCAGTGTTTGAAATTGAAGCACTTGGATTTGAGCACTAATAAGCTAAGTGGGGATATATGGATGGGAATTGCAAAGCTGAGAACTTTTTCTGTTTCAGAGAATTTTCTCAGTGGGAAAATTCCTCCATCAATTTTTCCAGTGAACTGCAATCTTGAAGTTCTTGACGTTTCAGAAAATATGTTCACAGGGAATGTCCCTAACCAGGTTGCTAACTGCAAGAATTTAGCGATTCTGAATCTCTCTAGCAACAAATTCAATGGATCAATACCTAAAGAAATTGGTTCCGTTTCTGGAATGGAAGCATTGTACTTGGGGAACAATAGTTTCTCGAGAGATATCCCAGAAGAACTCTTGAACTTGACCAATTTGGTGTTCTTGGACTTAACCAGAAACTATTTTGGTGGGGAGATACAAGAGATATTTGGGAAATTCAAGCAGGTTAAGTATCTTCTATTACACACAAATTCTTACACTGGAGGGTTATCTTCATCAGGAATTCTCAAACTACCAAACATTTTACGCTTGGACCTAAGTTACAACAACTTCTCAGGTCCATTGCCCGCAGAACTCTCTCAAATGTCAAGCCTCAAGTTATTAATGTTAGCCTACAATCAATTCAATGGACCTATTCCATCTGAATTTGGAAACTTGCCTCACCTTCAAGCTCTTGACCTATCATTCAACAACTTATATGGGCCAATCCCACCAACTCTTGGAAACTTAACTTCTCTTTTATGGCTCATGCTTGCAAACAATTCATTAACAGGTGAAATCCCAAGAGAGTTGGGAAACTGTTCAAGCTTATTATGGCTAAACCTTGCAAATAACAAACTCACTGGAAAATTCCCACCTGAATTGGCCAATATAGGAAGAAACGCCATGGTCACATTTGAATCAAATAGACAATATGACACGGTCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCATTTAGTTTTGTTTATGACATCCTTACAAGAAAGAATTGCAGAAGCATTTGGGACAGATTGCTTAAAGGGCATGGGATTTTTGCGATTTGTAGTGCAGGTTCATTTTCACCAACGTCTCAAATCTCTGGTTATGTTCAGCTAAGTGGGAACCAACTCTCGGGTGAAATCCCTCCAGAAATTGGAAAGATGCAGAATTTGAGCATGTTGCATTTAGGGTTCAATAAATTTTCTGGGAAATTACCTGCGGAGGTGAAAAGTATGCCGCTTGTGGTGTTCAACTTAACAAGAAATGAGTTTTCTGGGGAAATCCCTTGGGAAATTGGAAGCATGAAGTGTTTAATGAATCTTGATCTCTCTTACAACAATTTTTCTGGGGTTTTTCCTTCAAGTTTGGGCAGCTTAACAGAGCTCACAAAATTCAACATTTCTTATAATCCCCTTATTTCAGGTGAGATTCCATCGGCAGGACAACTAGCTACGTTCGAGAAATACTCATATTTGGGAGATCCCCTCTTGGATCTCCCAAGTTTCATCGACAACTCCACCGATGACAAAAAAAACACTACCTTTCGTAACAGAGCCATAAAAAAATCCATGAATGTCTCTGTTTTCCTGGTGATCATTGCTCTCATTCTTGCTTTCTTAGTATTTGGTCTTCTTACCGTCATTGTCTGTCTACTGATAAAATCCCCATCCGAAGAACCACTCCTGAGAGACATAAAAATCGACCATGAATCTGGAACTTCGTCCCCATGGTTGTCGGACACGGTTAAGGTTATTCGATTGGACAGGACAGCTTTCACACACGCTGATATCTTGAAAGCCACAGGAAACTTCTCAGACGACAGAATCATAGGCAAAGGAGGGTTTGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAGCTTCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTTAGTGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGATGGTTCAGAAAAACTATTAGTTTACGAATACATTTCAGGTGGGAGCTTAGAAGATCTCGTAACTGACAGAACAAGATTCACTTGGAAACGACGGCTAGAAGTAGCCATTGATGTTGCTCGAGCTTTGGTTTACTTACACCATGAATGTTACCTTCCAATTGTTCACAGAGATGTGAAGACAAGCAATGTGTTGTTGGATAACAAAACAGGGAAGGCTAAAGTCACAGACTTTGGACTGGCCAGAGTGGTTGATGTTGGAGACAGCCACGTCAGCACGATGGTGGCTGGGACGGTGGGGTATGTGGCGCCGGAGTATGGGCACACGTGGAAGGCGACGACAAAAGGGGATGTGTATAGTTATGGGGTGTTGGCTATGGAGTTGGCGACAGGAAGAAGAGCATTGGATGGAGGAGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGGGTCATGGAAGGAATAGGCCGATCGGCCGGCCGGTGTTCCCGGTGGTGCTGATGGGTTCTGGTTTGGTTGAAGGTATGGAGGAGATGGTGGAGCTGTTAAGGATAGGAGTGAGGTGCACGGCGGAGACACCGCAGGCTAGGCCTACAATGAAGGAGGTTCTGGATACGCTGATCAAGGTGTATAACTCCAAGGATGATTCAAGCTATGGACATATTTGGATTAACCGTTTGGATTAG 3300 0.4303 MSEHVTDSWGLVLICSLILFLAGKIVVAGDSLDTDREVLLQLKLYLNNQTLVDQGQYTNWNTTSSNPCDWSGIWCSGNETTRRVVGVDLSDNKITGKIFQNFSHLTQLIHLDLSHNTLSGEIPADLRRCQKLKYLNLSYNILPEELNLIGLTNLQTLDLSGNRLYGDLGFNFPAICDNLISLNISGNNFTGRIDECFDQCLKLKHLDLSTNKLSGDIWMGIAKLRTFSVSENFLSGKIPPSIFPVNCNLEVLDVSENMFTGNVPNQVANCKNLAILNLSSNKFNGSIPKEIGSVSGMEALYLGNNSFSRDIPEELLNLTNLVFLDLTRNYFGGEIQEIFGKFKQVKYLLLHTNSYTGGLSSSGILKLPNILRLDLSYNNFSGPLPAELSQMSSLKLLMLAYNQFNGPIPSEFGNLPHLQALDLSFNNLYGPIPPTLGNLTSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELANIGRNAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGHGIFAICSAGSFSPTSQISGYVQLSGNQLSGEIPPEIGKMQNLSMLHLGFNKFSGKLPAEVKSMPLVVFNLTRNEFSGEIPWEIGSMKCLMNLDLSYNNFSGVFPSSLGSLTELTKFNISYNPLISGEIPSAGQLATFEKYSYLGDPLLDLPSFIDNSTDDKKNTTFRNRAIKKSMNVSVFLVIIALILAFLVFGLLTVIVCLLIKSPSEEPLLRDIKIDHESGTSSPWLSDTVKVIRLDRTAFTHADILKATGNFSDDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLDGSEKLLVYEYISGGSLEDLVTDRTRFTWKRRLEVAIDVARALVYLHHECYLPIVHRDVKTSNVLLDNKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRPIGRPVFPVVLMGSGLVEGMEEMVELLRIGVRCTAETPQARPTMKEVLDTLIKVYNSKDDSSYGHIWINRLD 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1419 1099 PRINTS Leucine-rich repeat signature 151 164 - -
Alju13g1419 1099 PRINTS Leucine-rich repeat signature 108 121 - -
Alju13g1419 1099 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 883 1086 - -
Alju13g1419 1099 Pfam Leucine Rich repeat 415 428 IPR001611 GO:0005515
Alju13g1419 1099 Gene3D Phosphorylase Kinase; domain 1 770 882 - -
Alju13g1419 1099 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 395 1079 - -
Alju13g1419 1099 FunFam Leucine-rich repeat receptor protein kinase EMS1 220 314 - -
Alju13g1419 1099 SUPERFAMILY L domain-like 570 678 - -
Alju13g1419 1099 ProSiteProfiles Protein kinase domain profile. 803 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1419 1099 Gene3D Ribonuclease Inhibitor 266 361 IPR032675 -
Alju13g1419 1099 Gene3D Ribonuclease Inhibitor 174 265 IPR032675 -
Alju13g1419 1099 Pfam Protein kinase domain 804 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1419 1099 SUPERFAMILY L domain-like 338 503 - -
Alju13g1419 1099 FunFam Putative LRR receptor-like serine/threonine-protein kinase 342 503 - -
Alju13g1419 1099 Gene3D Ribonuclease Inhibitor 362 516 IPR032675 -
Alju13g1419 1099 CDD STKc_IRAK 809 1080 - -
Alju13g1419 1099 Gene3D Ribonuclease Inhibitor 31 173 IPR032675 -
Alju13g1419 1099 Pfam Leucine Rich Repeat 178 200 IPR001611 GO:0005515
Alju13g1419 1099 Gene3D Ribonuclease Inhibitor 563 713 IPR032675 -
Alju13g1419 1099 Pfam Leucine rich repeat 87 140 IPR001611 GO:0005515
Alju13g1419 1099 FunFam Putative LRR receptor-like serine/threonine-protein kinase 562 709 - -
Alju13g1419 1099 SUPERFAMILY Protein kinase-like (PK-like) 787 1078 IPR011009 -
Alju13g1419 1099 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Alju13g1419 1099 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Alju13g1419 1099 SMART serkin_6 803 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1419 1099 FunFam serine/threonine-protein kinase BRI1-like 2 764 882 - -
Alju13g1419 1099 Gene3D Transferase(Phosphotransferase) domain 1 883 1093 - -
Alju13g1419 1099 SUPERFAMILY L domain-like 45 359 - -
Alju13g1419 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Alju13g1419 1099 SMART LRR_typ_2 367 391 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 415 438 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 151 182 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 634 657 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 105 129 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 294 318 IPR003591 -
Alju13g1419 1099 SMART LRR_typ_2 439 463 IPR003591 -
Alju13g1419 1099 ProSiteProfiles Leucine-rich repeat profile. 131 152 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1419 Alju-ChrAlju13 32823031 32826530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1419 9 1088 Receptor kinase-like Gene Family AT1G55610 31.662 1.48e-150 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Alju13g1419 Pkinase 8.4e-45 CL0016