Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1408 ATGGGACTCTACATTGCCCTATTTCTCTTCTTGGCTTTTCTCCCACCGTCTTCAAGTCAAGAAGTTATGCATGCTTCAATTCTAGTTAATGGAAATCAAGCAAAAGCTGAAACTGATGATAACTTCATTTGTGCTACGATTGATTGGTGGCCTCATGACAAATGTGACTATGACCACTGCCCATGGGGATATTCATCAGTCACTAATTTGGACTTGTCTCACCCTTTCCTTGCCAAGGCAGTACAAGCTCTGAAGCCTTTGAGGATAAGATTGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGATGTAGAAACTTTGAAGGTGCCTTGCCATCCCTTTCAAAAGATGAAAGGTGGATTATTTGGATTTTCAAAGGGATGTTTACACATGAAAAGGTGGGATGAGCTGAATCATTTTTTCAAAGAAACAGGAGCCATTGTGACATTTGGCTTGAATGCACTTCATGGGAGGCACCAAATTAGTCACAATGTTTGGGGAGGAGACTGGGACTCTAGCAATGCTTATGCTTTCATTAGTTACACTGTCTCAAAGAGATATAAAATTGATTCATGGGAATTTGGTAATGAGTTAAGTGGTAAGGGCATTGGTGCAAGTGTTGGTCCTGCACAGTATGGAAAAGACTTAATACACCTTAAGAAAATTTTAGATCTCTTATATGAGCGATCTCGGTTCAAACCTGCGCTTGTAGCACCTGGAGGTTTCTATCAAAAGGATTGGTATAACAAACTACTACAGGTTTCAGGTTCTGGAATAATCAATGTTCTGACTCATCACATATACAATTTGGGCCCAGGCAGTGACCCGAATCTAGAAAAGAAGATTCTAGACCCTGCGCGTTTGAGCAACGTAGCATCAACATTTGGCAATCTTTCAGAAAGCATTGAAACAGTGGGTCCTTGGTCTTCTGCGTGGGTTGGAGAAGCTGGTGGGGCATACAATAGTGGCAGTCGTTATGTTTCTAGCACATTTTTAAACAGCTTTTGGTACTTGGATCAACTTGGAATGGCATCCACCTACAACACCAAAGTCTATTGTAGGCAGACTTTGATTGGAGGCTACTATGGCCTTCTCAACATAACCACTTTTTCTCCCAACCCAGACTATTATAGTGCGCTTTTGTGGCAAAGGCTTATGGGAAAGAAGGTTCTTCAGGCTTCAAGTGATTCTTCTTCGCCTTATTTGCGCACTTATGCCCATTGTTCAAAAGGAAGAGAAGGGGTGACAGTACTGTTGATCAATTTGAGCAATCAGACTAATTTCATTCTCAATGTTGAAAACCCTGTGGCTGCAAACAATGAAGGAACCAAAGAGGTGAAAAGGATACGCAGAGACAACTCTTTCACTTATCATCTCAAGAAGACATTTTCATGGGTTGGAACCAAAGGATCTTATGTCAGTTTCAGAGAAGAGTACCATTTAACTCCAAAAGATCGCGACCCTCGAAGCCGTACCGTGTTGCTAAACGGTATTCCAATACAGTTGACAAGCCAAGGAGACATACCAAATTTGGATCCAGTACTCAAGAATGTACAATCTCCCATTTATGTAGCTCCTCTGTCTATTGTATTTGTTGTGTACCCAAACTTTGATGCTCCAGCTTGTGTTAGACCCCAAAAGCATTAG 1644 0.4161 MGLYIALFLFLAFLPPSSSQEVMHASILVNGNQAKAETDDNFICATIDWWPHDKCDYDHCPWGYSSVTNLDLSHPFLAKAVQALKPLRIRLGGSLQDQVLYDVETLKVPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFKETGAIVTFGLNALHGRHQISHNVWGGDWDSSNAYAFISYTVSKRYKIDSWEFGNELSGKGIGASVGPAQYGKDLIHLKKILDLLYERSRFKPALVAPGGFYQKDWYNKLLQVSGSGIINVLTHHIYNLGPGSDPNLEKKILDPARLSNVASTFGNLSESIETVGPWSSAWVGEAGGAYNSGSRYVSSTFLNSFWYLDQLGMASTYNTKVYCRQTLIGGYYGLLNITTFSPNPDYYSALLWQRLMGKKVLQASSDSSSPYLRTYAHCSKGREGVTVLLINLSNQTNFILNVENPVAANNEGTKEVKRIRRDNSFTYHLKKTFSWVGTKGSYVSFREEYHLTPKDRDPRSRTVLLNGIPIQLTSQGDIPNLDPVLKNVQSPIYVAPLSIVFVVYPNFDAPACVRPQKH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1408 547 FunFam heparanase-like protein 3 62 383 - -
Alju13g1408 547 Gene3D Glycosidases 62 383 - -
Alju13g1408 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Alju13g1408 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Alju13g1408 547 PANTHER HEPARANASE-RELATED 18 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1408 Alju-ChrAlju13 32730189 32734308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1408 5 541 Glycoside Hydrolase AT5G07830 60.846 0.0 688