Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1379 ATGTTCAGCCCAAACCCGGATTTCAGGAGGCTATTAATTGGAAATGGAAACCCTACCCAAAACCCTGTCAATACTCTCGATCATAGTCTTCCTCACTCTCCGCCCACCTTCCTCTCCAGCATGGCTGCCGCGGCTAGGCCTCTCGTCACCGTGCAAGCCCTTGAGGGCGATATGGCCACCGACGCACCCCCAACAGTTCCACTTCCTGATGTCATGAAGGCATCGATTAGACCCGATATTGTCACCTTCGTTCACTCCAATATTTCCAAGAATAGCCGGCAACCTTACGCCGTCAGCAGGCGCGCCGGCCACCAGACCTCCGCTGAGTCTTGGGGTACTGGCCGCGCGGTCTCTCGTATCCCTCGTGTCCCCGGTGGTGGCACCCATCGCGCGGGGCAGGGTGCTTTCGGCAACATGTGTCGTGGTGGACGCATGTTCGCTCCTACCAAGACTTGGCGCCGCTGGCACCGTAGAGTTAATGTGACTCAGAAGCGTCACGCAGTCGTTTCGGCCATTGCTGCTTCGACGGTTCCGTCACTTGTTATGGCTCGCGGTCACCGGATTGAGTCCGTGCCGGAGATGCCTCTGGTCGTGAGTGATTTAGCTGAGGGTGTTGAGAAAACGAAGGACGCAATCAAAGTTCTGAAGCAGGTTGGTGCTTTTCCTGATGCTGAGAAGGCAAAGGATAGCCATTCTATTCGACCAGGTAAGGGAAAGATGAGAAATCGCCGATATATTTCTCGCAAAGGTCCTCTTATTGTGTATGGAACTGAAGGAGCTAAAGCGGTGAAGGCATTTAGGAACATACCTGGCGTTGAGGTTGCTAATGTCGAAAGGTTGAATCTGCTGAAGCTTGCTCCTGGTGGTCATCTTGGGAGATTCGTCATTTGGACCAAGTCGGCTTTTGAGAAGCTGGATTCTGTCTATGGATCGTTCGATAAACCATCAGAAAAGAAGAAGGGCTACCTGCTTCCGAGGTCTAAGATGGTCAATTCGGATTTAGCAAGGATCATCAACTCTGATGAGATTCAGTCTGTCGTAAGGCCGATCAAGAAGGAAGTCAAGAGGGCACCACTGAAGAAGAACCCACTGAAGAACTTGAACGCTATGTTGAAGCTGAATCCATATTACAAGACAGCTAAGAGGATGGCTCTTCTTGCTGAAGCTCAGCGAGTGAAAGCAAAGAAGGAGAAACTCGATAAGAAGAGGAGTTCTGTTCCAAAGGAGGAGGCTTCTGCTATCAAGGCTGCAGGAAAGGCATGGTACCACACCATGGTCTCTGACAGTGATTACACCGAATTTGAGACCTTTTCAAAATGGTTGGGCGTTTCCCAGTAA 1338 0.512 MFSPNPDFRRLLIGNGNPTQNPVNTLDHSLPHSPPTFLSSMAAAARPLVTVQALEGDMATDAPPTVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRHAVVSAIAASTVPSLVMARGHRIESVPEMPLVVSDLAEGVEKTKDAIKVLKQVGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSVYGSFDKPSEKKKGYLLPRSKMVNSDLARIINSDEIQSVVRPIKKEVKRAPLKKNPLKNLNAMLKLNPYYKTAKRMALLAEAQRVKAKKEKLDKKRSSVPKEEASAIKAAGKAWYHTMVSDSDYTEFETFSKWLGVSQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1379 445 Pfam Ribosomal protein L4/L1 family 66 306 IPR002136 GO:0003735|GO:0005840|GO:0006412
Alju13g1379 445 Pfam 60S ribosomal protein L4 C-terminal domain 320 392 IPR025755 -
Alju13g1379 445 FunFam 60S ribosomal protein L4 43 348 - -
Alju13g1379 445 ProSitePatterns Ribosomal protein L1e signature. 160 186 IPR013000 -
Alju13g1379 445 Gene3D - 43 348 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju13g1379 445 PANTHER 60S RIBOSOMAL PROTEIN L4 44 438 IPR045240 -
Alju13g1379 445 Coils Coil 382 402 - -
Alju13g1379 445 MobiDBLite consensus disorder prediction 94 135 - -
Alju13g1379 445 SUPERFAMILY Ribosomal protein L4 55 307 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju13g1379 445 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1379 Alju-ChrAlju13 32508573 32510791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1379 42 445 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.673 0.0 675